Gene Rxyl_0641 details

Gene Information

• Locus tag: Rxyl_0641
• Symbol: cbiD
• ID: 4116507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 675432
• End bp: 676598
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 638035426
• Product: cobalt-precorrin-6A synthase
• Protein accession: YP_643423
• Protein GI: 108803486
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1903] Cobalamin biosynthesis protein CbiD
• TIGRFAM ID: [TIGR00312] cobalamin biosynthesis protein CbiD

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0538699
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGAGC GGAGGGAGCT TCGCGAGCCC CCCATGCCCC CGAGCATGGC CCGGGTGAGG 
GGGAGGAAGC TCAGGACCGG CTGGACCACC GGCACCTGCG CCGCGGCGGC GGCGAAGGCC 
GCGGCGAGGG CGCTTGCGAG CGGCGAGGCG CAGGAGATGG TGGAGGTGAG GCTCCCCGGG 
AGGGGCGAGG GGCGGCGGGT CCGGTTCGGG GTCGAGCGGT GCGAGCTCGG GGAGGGGTGG 
GCCGAGGCGG TGGTGGTCAA GGACGCCGGG GACGACCCGG ACGTCACCCA CGGGGCGCAC 
CTCACCGCCC GGGTCTCGTG GCGGGAGGAG CCGGGGGTGG AGCTCGACCG CGGGGAGGGG 
GTCGGGGTGG TGACAAAGCC GGGGCTCGGG CTCCCCGTCG GCGCCCCGGC GATAAACCCC 
GTGCCGCGGC GCATGATCCT GTACTCCCTC GAGGAGGCGC TCGATACGCG GAGGCGGGGG 
GTGCGGGTTG TCATCAGCGT GCCGGGCGGG GAGGAGATGG CGAGAAAGAC CACCAACCCC 
CGGCTCGGGA TCGTCGGGGG GATCTCCATC CTGGGCACCA CCGGGATCGT GCGCCCCTTC 
TCCACCGCCG CCTGGGCGGC GAGCGTGGTG CAGGCCATAG ACGTGGTGGC CGCCCAGGGG 
GGCGACACCT TCGTGCTCTC CACCGGCGGG CTCACCGAGC GGGCGGCGAT GCGCCTGCTG 
CCCCACCTGG AGGAGGTGTG CTTTATCGAG GTGGGGGACT TCACCGGGCA GGCGGTCCGG 
CGGGCCGCGA AGAGGGGCCT CGGGCGGGGC TTCTTCGTGG GGATGGCGGG CAAGCTCGCC 
AAGCTGGCCT CGGGGGTGAT GATGACCCAC TGGACCCGCT CGCGGGTGGA CACCAGCCTG 
CTCGCGGAGA TCACGCGCAA AGCCGGGGGG AGCGAGCGCC TCGCGGAGGA GGTGGAGGGG 
GCCAACAGCG CCCGCCACGC CTACGAGCTG TGGCGGGCGG CGGGGCTCTC GGGGGCGCCG 
CGCCTGCTGT GCGCCCGGGT GGCGGAGAAC CTGCGCGAGC ACGCGGGAGG GGCGCTGGAG 
ATGCACGCGA TCATGGTGGA CTTCGACACC CTGGAGCCCG TGGGGGCGAG CCCGGGGGCT 
CTGGAGCTCA CGGCGTGGAG GGGATGA 

 

Protein sequence

MPERRELREP PMPPSMARVR GRKLRTGWTT GTCAAAAAKA AARALASGEA QEMVEVRLPG 
RGEGRRVRFG VERCELGEGW AEAVVVKDAG DDPDVTHGAH LTARVSWREE PGVELDRGEG 
VGVVTKPGLG LPVGAPAINP VPRRMILYSL EEALDTRRRG VRVVISVPGG EEMARKTTNP 
RLGIVGGISI LGTTGIVRPF STAAWAASVV QAIDVVAAQG GDTFVLSTGG LTERAAMRLL 
PHLEEVCFIE VGDFTGQAVR RAAKRGLGRG FFVGMAGKLA KLASGVMMTH WTRSRVDTSL 
LAEITRKAGG SERLAEEVEG ANSARHAYEL WRAAGLSGAP RLLCARVAEN LREHAGGALE 
MHAIMVDFDT LEPVGASPGA LELTAWRG