| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0635 |
|---|
| Symbol | cobN |
|---|
| ID | 4116929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 666482 |
|---|
| End bp | 670195 |
|---|
| Gene Length | 3714 bp |
|---|
| Protein Length | 1237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638035420 |
|---|
| Product | cobaltochelatase subunit CobN |
|---|
| Protein accession | YP_643417 |
|---|
| Protein GI | 108803480 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
|---|
| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTCCC CTGAGAGGAT CGTGTTCCTG AGCACGGCGG ACACCGAGAT CCTGGCCGCA
GCCCGCGCCG CGCGCGCCCT CCCCGAGGGC TTTCCGGAGG TGCGCTGCGC CAACCCCGCC
AGGATGGAGG AGCCCGCCGC GGAGCTGGAG GGGCTGCTCG AGGGGGCGCG CGCCGTGATC
GTCCGGCTCC TCGGGGGGCG CAGGGCCTGG CCCGGCGGCT TCGAGCTCCT GCGCGCCCGG
TGCCGGAGCC TCGGGGTGCC GCTCCTCGCC CTCGGCGGGG AGGCCGTCCC CGACGCCGAG
CTCGCCGCCC TCTCCACCGC CCCCCGGGGG GCCGTGGCCC AGGCCTTCGA GTACCTGCGG
CACGGCGGGG TGAGAAACAC CGCGAACCTC CTGCGCTTCG TGGCCGACAC CCTGCTCATG
GGCGGCTACG GCTTCGACCC CCCGGAGCCC GTGCCGCAGG CCGGCACCTA CCGCCCGGAG
GGCCTCTCCT TCCGCCCGGA GAGGCCCACC GTCGGGGTCG TCTTCTACCG GGCCCACCTT
CTGGCCGGGA ACACCGCCTT CGTGGACGAG CTGTGCCGGG CGCTCGAGGA GGCCGGGGCG
AACCCCCTCC CGGTCTACTG CTACTCCCTG CGCGGCGGGG GGGAGGAGGC CGCCCTCCGC
CTGCTCGAGG GGAGGGCGGA CGCCCTCGTG GTCACCGTGC TCGCCAGCGG GGGCTCCGGG
GCCGCCGACG CCGTGCGGGA GGGGAACCCG GAGGACTGGC TGGAGTGGGA GGCCCCCGCG
CTCGAGCGCC TCGGGGTGCC GGTGGTGCAG GGGATCTGCG CGACCACCCC CCGGGGGGAC
TGGGAGGGCT CCCCCGCCGG GCTCTCCCCG CTGGACGTCG CCTGGCAGGT GGCCATCCCC
GAGTTCGACG GCCGCGTCGT CTCCGTGCCC TTCTCCTTCA AGGAGACCGT GCGGGAGGGC
TCCCCCGTCG GGGCGCCGCT CACCGTCTAC CGCCCCGACC CCGAGCGTGC CCGGAGGGTC
GCCGGCATCG CCGCCCGGCT CGCCCGGCTC CGGCGCACCC CCAACGAGCG CAAGCGGGTC
GCCATCCTCC TCTCCAACTA CCCCACCAGG CACTCCCGGG TGGGCAACGC CGTCGGGCTC
GACACCCCGA GGAGCGCGGT GCGGCTGCTC GCGCGGCTCA AGGGGGCCGG CTACCGGGTC
GAGGGCGCCC CGGAGGAGGG GGACGCCCTG ATCCACGCGC TCGTACGGGC CGGGGGGTAC
GACCAGGAGT TCCTCACCGC CGGCCAGCTG CAGAACGCCG CGGGCAGGGT CGAGGCCTCC
CGCTACGCGG GCTGGTTCCG CAGGCTCCCG GAGGCGCTGC GGCGGGAGGT CGAGGAGCAC
TGGGGACCGC CGCCCGGCGA CCTGTACGTG GAAGGCGGCG GCATCGCGGT CGCGGGGCTG
CGCTTCGGCA ACGTCTTCGT CGGCATCCAG CCGCCCCGCG GCTTCGGGGA GAACCCCGTC
GCCATCTACC ACGACCCCGA CCTCCCGCCC TCCCACCACT ACCTGGCCGT CTACTGGTGG
CTGGAGGAGG TGTTCGGGGC GCACGCCGTC GTCCACCTGG GCAAGCACGG CACCCTGGAG
TGGCTGCCGG GCAAGTCGCT GGGGCTCTCC GCCGCCTGCG CCCCTGATGT GGCGCTGGGG
AGTTTGCCCC TCCTCTACCC CTTCGTGGTC AACGACCCCG GCGAGGGGAC CCAGGCCAAG
CGGCGGGCCC ACGCCGTGAT CGTGGACCAC CTCATCCCCC CGATGACCCG GGCGGAGACC
TACGGCGGGC TCGCCCGGCT GGAGGAGCTG CTGGACGAGT ACTACCAGGT GGAGACCCTC
GACCCCGCCA AGCTCCCCGC CATAGAGCAG AGGATCTGGG AGACCCTCCG CGAGGCCGAG
CTGCACCGCG ACCTCGGGGT GGAGGAGAAG CCGGAGGAGT TCTCGGGCTT CCTGAGCCAC
GTGGACGGCT ACCTCTGCGA GATAAAGGAC CTGCCGATCC GGGGCGGGCT GCACGTGCTC
GGCGAGCCCC CGGAGGGCGA GGGCCTGCGC CACCTCGCCG CCCAGATAAT GCGGCTCGGG
GCGGGGGAGG TCCCCGGGCT GCGGCGCGCC GTGGCCGCGG CCTTCGGGCT GGACGAGCGG
GAGCTCGCCG CGGACGGCGG CGCCCCGGCG CGGGCGCCGG AGGGCCTGCT CTCCCGCTTC
CCGGGGCCCT CCGCCACCGC CTCCGACCTT CTGGACCGGC TGGAGGAGGC GCAGCAGGCC
CTGCTCGCCG CGCTGGAGCG GCGCGGGTGG GACCCGGGGG CCGCGGAGGA GGTCTGTGGG
GAGGTGCTCG GCCGCGCGGA CGCGGGGGTG GCACGCTCGC TGCGGTTCGC CGCCGGGGAG
GTCGTCCCCC GCCTGCTCGG CGCCTCCCGG GAGATAGAGA GCCTCCTCGC GGGCCTTGAG
GGGCGCTACG TCCCCGCCGG GCCCTCCGGC TCGCCCACCC GCGGCCAGAT AAACGTCCTG
CCCACCGGGC GCAACTTCTA CTCCGTCGAC CCCCGGGCCA TCCCCTCCCG GCTCTCCTGG
GAGGTGGGGC AGCGGCTCGC CGGGGACCTG CTGGAGCGGC ACCTGCGGGA GGAGGGGCGC
TACCCGGAGA CCGTCGGCAT CGTGGTCTGG GGCACCGCGG CCATGCGCAC CCGGGGCGAC
GACGTGGCCG AGATCCTCGC CCTGCTCGGG CTGCGCCCCG TGTGGGACGA GGAGTCGCTG
CGGGTCAGGG GGCTCGAGGT CATCCCGCTC GAGGAGCTGG GGAGGCCCAG GATCGACGTG
ACCGTCAGGA TCAGCGGCTT CTTCCGCGAC GCCTTCCCCA ACCTCGTCTC CCTCATCGAC
GACGCCGTCC GGACGGCGGC GGGGCTGGAG GAGCCCGGGG AGATGAACTT CGTCAGGAAG
CACGTGGTGC GGGAGCTCGC GGAGGGGAGG GAGGCGCGGC GGGCCACCCT GCGCGTCTTC
GGCTCCGCGC CCGGCGCCTA CGGGGCGGGG CTCCTGCCGC TCATCGACGC GCGCAACTGG
CGCAGCGACG AGGACCTCGC CGAGGTCTAC GCCGTCTGGG GCGGGTACGC CTACGGGCGG
GGCGTGGACG GGGTGGAGGC GAGGGCCGAG CTCGAGGCCA ACCTGCGGCG CACCGAGGTC
GCGGTGAAGA ACGTGGACAA CCGCGAGCAC GACATCTTCG ACTCCGACGA CTACTTCCAG
TACCACGGCG GCATGATCGC GGCGGTCCGC GCCCTTGCCG GGCGCAACCC GCGGGGCTAC
ATCGGCGACT CCGCCGACCC CTCCCGCGTA AGGACCCGCG ACCTCGCCGA GGAGGCGCGG
CGCGTCTTCC GCGGCCGGGT GGCGAACCCG AAGTGGGTGG GGGCCATGAT GCGCCACGGC
TACAAGGGGG CCTTCGAGCT CTCGGCGACG GTGGACTACC TCTTCGGCTA CGACGCCACC
GCAGAGGTGG TCGAGGACTG GATGTACCGC GAGGTGACGA GGAGGTACCT GCTCGACGGG
GAGGTGAGGC GCTTTATGCA GGAGTCCAAC CCCTGGGCGC TCAGGGCCAT AGGCGAGCGG
CTGCTCGAGG CCGCCGAGCG CGGCCTGTGG GCCGCGCCCG ACCCGCGGGA CCTGGAGGAG
ATAAAGCGCA TCTACCTGCA GGCCGAGGGC CTGCTGGAGG AGGGCGGCGC GTGA
|
|---|
| Protein sequence | MPSPERIVFL STADTEILAA ARAARALPEG FPEVRCANPA RMEEPAAELE GLLEGARAVI
VRLLGGRRAW PGGFELLRAR CRSLGVPLLA LGGEAVPDAE LAALSTAPRG AVAQAFEYLR
HGGVRNTANL LRFVADTLLM GGYGFDPPEP VPQAGTYRPE GLSFRPERPT VGVVFYRAHL
LAGNTAFVDE LCRALEEAGA NPLPVYCYSL RGGGEEAALR LLEGRADALV VTVLASGGSG
AADAVREGNP EDWLEWEAPA LERLGVPVVQ GICATTPRGD WEGSPAGLSP LDVAWQVAIP
EFDGRVVSVP FSFKETVREG SPVGAPLTVY RPDPERARRV AGIAARLARL RRTPNERKRV
AILLSNYPTR HSRVGNAVGL DTPRSAVRLL ARLKGAGYRV EGAPEEGDAL IHALVRAGGY
DQEFLTAGQL QNAAGRVEAS RYAGWFRRLP EALRREVEEH WGPPPGDLYV EGGGIAVAGL
RFGNVFVGIQ PPRGFGENPV AIYHDPDLPP SHHYLAVYWW LEEVFGAHAV VHLGKHGTLE
WLPGKSLGLS AACAPDVALG SLPLLYPFVV NDPGEGTQAK RRAHAVIVDH LIPPMTRAET
YGGLARLEEL LDEYYQVETL DPAKLPAIEQ RIWETLREAE LHRDLGVEEK PEEFSGFLSH
VDGYLCEIKD LPIRGGLHVL GEPPEGEGLR HLAAQIMRLG AGEVPGLRRA VAAAFGLDER
ELAADGGAPA RAPEGLLSRF PGPSATASDL LDRLEEAQQA LLAALERRGW DPGAAEEVCG
EVLGRADAGV ARSLRFAAGE VVPRLLGASR EIESLLAGLE GRYVPAGPSG SPTRGQINVL
PTGRNFYSVD PRAIPSRLSW EVGQRLAGDL LERHLREEGR YPETVGIVVW GTAAMRTRGD
DVAEILALLG LRPVWDEESL RVRGLEVIPL EELGRPRIDV TVRISGFFRD AFPNLVSLID
DAVRTAAGLE EPGEMNFVRK HVVRELAEGR EARRATLRVF GSAPGAYGAG LLPLIDARNW
RSDEDLAEVY AVWGGYAYGR GVDGVEARAE LEANLRRTEV AVKNVDNREH DIFDSDDYFQ
YHGGMIAAVR ALAGRNPRGY IGDSADPSRV RTRDLAEEAR RVFRGRVANP KWVGAMMRHG
YKGAFELSAT VDYLFGYDAT AEVVEDWMYR EVTRRYLLDG EVRRFMQESN PWALRAIGER
LLEAAERGLW AAPDPRDLEE IKRIYLQAEG LLEEGGA
|
|---|
| |