| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0607 |
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| Symbol | |
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| ID | 4116377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 633965 |
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| End bp | 635230 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 638035393 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_643390 |
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| Protein GI | 108803453 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACA TCCTCGAGGC CATAGAGAGG AAGAAGCGGG GCGGGGAGCT CCCCGAGCCC
CTCATCCGCT CCGTGGTGTC GGGCTACACC GCCGGCGAGA TCCCAGACTA CCAGATGGCC
GCCCTGCTCA TGGCCATCTT CATCCGGGGG ATGAGCTACG GGGAGACCCT CGCCCTCACC
CGCGCGATGG CCGACTCCGG GCGGCGCTAC TCCTTCCCGG AGTGCGTGGA CAAGCACTCC
ACCGGGGGGG TCGGGGACAA GGTCAGCCTC ACCGCCCTCC CGCTGGCCGC CGCCTGCGGG
GCGCCGGTGG CCAAGCTCTC CGGGCGGGGC CTGGGGATCA CCGGCGGGAC CGTAGACAAG
CTGGAGTCCA TCCCCGGCCT GAGCTGCGCG CTCACCGAGG AGCGCTTCCG CAGGCAGGTG
GAGGAGGTCG GGCTGGCCAT CGCCGAGGCC GGGGAGCTCG CCCCCGCGGA CAGGGCCATC
TACGCCCTCC GGGACGCCAC CGGCACGGTG GACTCGCTGC CCCTCATCGG GAGCTCCATC
GTCTCCAAGA AGGCGGCCAC CGGCGCCGGG CACCTGCTCT ACGACGTGAA GTGCGGCTCC
GGGGCGTTCA TGCGCACCCG GCGGGAGGCC CGGGAGCTGG CCGGGCTCCT CGTCCGCCTC
AGCGCGGACC TGGGCATCCG GGCGTCGGCC GTGATCTCGG ACATGAGCCA CCCGCTGGGC
CGGGCCGTGG GCAACGCCCT GGAGGTGCGC GAGAGCCTCC GCTTCCTGCG GGGGGAGGGG
GCGCCGGAGG ATCTGGCGGC GGTGGCCCGC GCCGTCGCCG TCCGGCTGCT GGAGCTCAAG
GGCGTGCCCG AGCCGGAGCG GGCCGTCGAG CGGGCGCTCG CGAGCGGGCA GGCCTACGAG
CTCTTCGCCC GCTTCGTGCG GGCCCAGGGC GGGGACGAAG GAGCCCTGGA GCGCCTCCCG
CTCTCCCCGC GGGTGCGCGA GGTCCGCTCC CCCGCCGCCG GCCACGTCGA GCGCTTCGAC
GCCCTCGGGG TGGGCCGCGC CGCCCTCCTG CTCGGGGCCG GGCGCCGGAA AAAGGGCGAC
CCGGTGGACC ACGGGGCCGG GGTGGAGCTC CTGGTGGGCC CCGGGGAGCG GGTCGAGGAG
GGGCAGGCGG TCGCCCGGCT CTACGGGGAC CGGGACGCCG AGCGGGCCGC CGGGCTCGTC
GCCGGGGCGC TGCGCCTCTC CCCCGAGCCC GCGCCACCGC CCCCTGCTAT TCTGGATAGC
CTCTAG
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| Protein sequence | MSDILEAIER KKRGGELPEP LIRSVVSGYT AGEIPDYQMA ALLMAIFIRG MSYGETLALT
RAMADSGRRY SFPECVDKHS TGGVGDKVSL TALPLAAACG APVAKLSGRG LGITGGTVDK
LESIPGLSCA LTEERFRRQV EEVGLAIAEA GELAPADRAI YALRDATGTV DSLPLIGSSI
VSKKAATGAG HLLYDVKCGS GAFMRTRREA RELAGLLVRL SADLGIRASA VISDMSHPLG
RAVGNALEVR ESLRFLRGEG APEDLAAVAR AVAVRLLELK GVPEPERAVE RALASGQAYE
LFARFVRAQG GDEGALERLP LSPRVREVRS PAAGHVERFD ALGVGRAALL LGAGRRKKGD
PVDHGAGVEL LVGPGERVEE GQAVARLYGD RDAERAAGLV AGALRLSPEP APPPPAILDS
L
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