Gene Rxyl_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0567 
Symbol 
ID4116748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp596295 
End bp597299 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID638035355 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_643353 
Protein GI108803416 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTAGTA CTGCGCTGAT CACCGGCATA ACGGGGCAGG ACGGGGCTTA TCTGGCGCAA 
CTTCTCTTGG AGAAGGGTTA TCGGGTGGTG GGCGCATTCC GCCGGGCAAG CATGGTGAAT
ACGGCTCGTC TGGACGCCCT TGGTATAGCG GAGCACGTAG AGCTGGTGCC GTTCGATCTG
ACGGACCACG GCAACATGCG GCGGGTAATC GAGGCAGTGG CGCCGGACGA AGTGTACAAC
CTGGCGGCCC AGAGCTTCGT CGGGGTGTCC TTCGAGCAGC CGGTGACGAC CGGCGAGATC
ACGGGGGTGG GGGTGGTGAG GCTCCTGGAG GCGATCCGGG AGGTGAACCC GGAGATCCGC
TTCTACCAGG CTTCCACGAG CGAGATGTTC GGCAAGGCGC GGGAGACTCC ACAGAACGAG
ACGACGCCCT TCCATCCCCG CAGCCCCTAC GCGGCCTCGA AGCTCTACGC CCACTGGACG
GCCGTGAACT ACCGGGAAGC CTACGGGATG CACGCCTCCT CGGGCATCTT GTTCAACCAT
GAGAGCCCGC TCAGGGGTGT GGAGTTCGTG ACGCGCAAGA TCTCCCTGGG CGCCGCCCGC
ATAAAGTACG GCTTGCAGGA GAAGCTCACG CTCGGAAACC TCGAGGCTAG GCGCGACTGG
GGGTATGCGA AGGAGTACGT TGAGGCGATG TGGTTGATGC TGCAACAGCC GGAAGCCGAG
GATTATGTCG TTGCTACCGG CGAGAGCCAC TCCGTGCGGG AGTTCGTCGA GACGGCTTTT
GAGGTGGCAG GGCTAGACTG GGAGAGGTAT GTGGTTACTG ATCCCGCCTT TCTGCGCCCG
GCCGAAGTGG ACTTCCTGCT GGGAGACCCC TCCAAGGCAA AGAGCAAACT CGGGTGGGAG
CCCAGAACCA CGTTTAGGGA GTTGGTTGAG ATCATGGTGG AGGCAGATCT GCGGCGGGCG
GCGTTCGAGG CCCGCCACGG CCGGGAGATG TTGGAGATCC GGTAG
 
Protein sequence
MSSTALITGI TGQDGAYLAQ LLLEKGYRVV GAFRRASMVN TARLDALGIA EHVELVPFDL 
TDHGNMRRVI EAVAPDEVYN LAAQSFVGVS FEQPVTTGEI TGVGVVRLLE AIREVNPEIR
FYQASTSEMF GKARETPQNE TTPFHPRSPY AASKLYAHWT AVNYREAYGM HASSGILFNH
ESPLRGVEFV TRKISLGAAR IKYGLQEKLT LGNLEARRDW GYAKEYVEAM WLMLQQPEAE
DYVVATGESH SVREFVETAF EVAGLDWERY VVTDPAFLRP AEVDFLLGDP SKAKSKLGWE
PRTTFRELVE IMVEADLRRA AFEARHGREM LEIR