Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0567 |
Symbol | |
ID | 4116748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 596295 |
End bp | 597299 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638035355 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_643353 |
Protein GI | 108803416 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTAGTA CTGCGCTGAT CACCGGCATA ACGGGGCAGG ACGGGGCTTA TCTGGCGCAA CTTCTCTTGG AGAAGGGTTA TCGGGTGGTG GGCGCATTCC GCCGGGCAAG CATGGTGAAT ACGGCTCGTC TGGACGCCCT TGGTATAGCG GAGCACGTAG AGCTGGTGCC GTTCGATCTG ACGGACCACG GCAACATGCG GCGGGTAATC GAGGCAGTGG CGCCGGACGA AGTGTACAAC CTGGCGGCCC AGAGCTTCGT CGGGGTGTCC TTCGAGCAGC CGGTGACGAC CGGCGAGATC ACGGGGGTGG GGGTGGTGAG GCTCCTGGAG GCGATCCGGG AGGTGAACCC GGAGATCCGC TTCTACCAGG CTTCCACGAG CGAGATGTTC GGCAAGGCGC GGGAGACTCC ACAGAACGAG ACGACGCCCT TCCATCCCCG CAGCCCCTAC GCGGCCTCGA AGCTCTACGC CCACTGGACG GCCGTGAACT ACCGGGAAGC CTACGGGATG CACGCCTCCT CGGGCATCTT GTTCAACCAT GAGAGCCCGC TCAGGGGTGT GGAGTTCGTG ACGCGCAAGA TCTCCCTGGG CGCCGCCCGC ATAAAGTACG GCTTGCAGGA GAAGCTCACG CTCGGAAACC TCGAGGCTAG GCGCGACTGG GGGTATGCGA AGGAGTACGT TGAGGCGATG TGGTTGATGC TGCAACAGCC GGAAGCCGAG GATTATGTCG TTGCTACCGG CGAGAGCCAC TCCGTGCGGG AGTTCGTCGA GACGGCTTTT GAGGTGGCAG GGCTAGACTG GGAGAGGTAT GTGGTTACTG ATCCCGCCTT TCTGCGCCCG GCCGAAGTGG ACTTCCTGCT GGGAGACCCC TCCAAGGCAA AGAGCAAACT CGGGTGGGAG CCCAGAACCA CGTTTAGGGA GTTGGTTGAG ATCATGGTGG AGGCAGATCT GCGGCGGGCG GCGTTCGAGG CCCGCCACGG CCGGGAGATG TTGGAGATCC GGTAG
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Protein sequence | MSSTALITGI TGQDGAYLAQ LLLEKGYRVV GAFRRASMVN TARLDALGIA EHVELVPFDL TDHGNMRRVI EAVAPDEVYN LAAQSFVGVS FEQPVTTGEI TGVGVVRLLE AIREVNPEIR FYQASTSEMF GKARETPQNE TTPFHPRSPY AASKLYAHWT AVNYREAYGM HASSGILFNH ESPLRGVEFV TRKISLGAAR IKYGLQEKLT LGNLEARRDW GYAKEYVEAM WLMLQQPEAE DYVVATGESH SVREFVETAF EVAGLDWERY VVTDPAFLRP AEVDFLLGDP SKAKSKLGWE PRTTFRELVE IMVEADLRRA AFEARHGREM LEIR
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