Gene Rxyl_0559 details

Gene Information

• Locus tag: Rxyl_0559
• ID: 4116740
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 585742
• End bp: 587685
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 638035347
• Product: O-antigen polymerase
• Protein accession: YP_643345
• Protein GI: 108803408

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.024189
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGAAAGA TGGAGGGTCT TCTCAAGCAC GCTAGGAGCC GCAGGCTCCT CCCCACGCTG 
GCGCTCGCGG CGCTCGCGCT CTCGGCGGGC TGGATGGGCG CCTGGGGGGC GGGGTACTTC 
GTGGCCGTGT GGGGTCCGGT GGCGCTGCTC TTGGCCGCGC TCGCGCTGGC GCTCTCGCTC 
GCGGGCGTGC CGCCGGGGCG GGGCGCCGCC CGGGCGGCGC TCGGGCTCCT CGCCGCCTAC 
ACCCTGTGGA CGTTCGCCTC GGTCCTGTGG GCGGCCAACA AAGGCGACGC CTGGGCGGGG 
GCGGGCAAGA CGGCGGTGTA CCTGCTGGCC TTCTGGGTCG CGGCGGCGCT GGTGGGGGCC 
GGGGCCTCGC GACGCTGGGC GCTCGCCGCC TCGGTGCTCG GCCCCGCGGC GGTGGCGGCG 
CTCACCCTCC CCGTCCTCCC CGAGAGCATG GGCCAGATGT TCCACGCCAA CCGCCTGCTC 
GGGACGGTGA ACTACTACAA CGGCGAGGCG GCGCTGCTGC TGGTCCCCTT CTGGGTGGCG 
GTGTACCTGG GGGGCTCGCG GCAGGCGCAC CCCCTGCTGC GGGGGGCGGT GCTGGCGGGG 
GCCGCGCTCT CGGCGCAGCT CGCCGTCCTC ACCCAGTCGC GCGGGGCCAT GTTCGCCATG 
GCCGCCTCGC TGCCGGTGTT CTTCCTGCTC TCGGGGAAGC GGCTGCGCGG GCTGCTCGCG 
CTCGCGGCCC CGGCCGCGGC GGTCTCTCTC TCCTTCCCGG AGCTGAACCG CGTCTACCTG 
GAGTTCCTGA ACGAGGGCAG CCCCCGCGAG GCGCTGCAGG CGGCGCTCCC GGAGGTGTGG 
CTGCTCGCGG CGGGGGCCGG CCTCTACGGG CTGGCCTGGG GGGCCGCCGA CGCCGTGTGG 
AGCGTGGACC GGAGGGTGGT GCGGGCGGCG GGGGCCGTGG CGCTCGCCGC GGCCCTGGTA 
GGGGGGGCGG CGGGGGCGCT CGCCGCCGTG CAGCGGGTGG GCGACCCCGT GGCCTGGGCC 
GGGGAGAAGT GGGAGGCCTT CAGGACGAAC GACACGGCGG GGCAGGAGCA GAGCCGTTAC 
CTGAGCGTCT CGGGCTCCGG GCGGTACACC CTGTGGCGGG TGGCCTGGGA GGACTTCGCC 
CGCCGCCCGG TGCTGGGGGT GGGCACCCAC AACTACGAGG CCACCTACTA CCGGCTGCGG 
GAGCAGGCGG TGGGCTACGT GCGCCAGCCG CACTCGCTGC CGCTGGAGGT GCTGGCCGAG 
AGGGGCGTGG TGGGCGGGGC GCTGCTCGCG GGCTTTCTCG CGGTGTGCGT CGGCGCGGGG 
CTGCGGGAGC GCTTCGGGAG CCTGGGCGGC GAAGGCCGGG CGCAGGTGGG GGCGCTCGCG 
GCGGCGGTGG CCTACTGGTT CGTGCACAGC TCCGCCGAGT GGTTCTGGCA GATGCCCGGG 
GTAACCCTCC CCGCCTTCCT GTACCTGGCC CTCCTGGCCT CTCCCTGGCG GGTGGCGCGC 
CCCTCCCCCC TGCGGTGGCC GCTGCGCGCG GCCGCGGCGG CGGTGGCGCT CGCCGCCGCC 
GCGGCCGTAG CACCCCTCTA CCTGGCCGAC CGGGCGGAGG CGCAGAGCCA CGGCCTCCGG 
GACCCGCGGG AGGCGCTCGC CGCCGTGGAG CGGGCGCAGA GCCTGAACCC CTGGGACCCC 
CGGCTGCGGG AGCGGGAGGC GGAGCTCGCG ATGCAGGCCG GGCAGTGGGA GCGGGCGGAG 
AGGGCCTACA GGGAGGCCAT AGAGCTGAAC CCGCGGCACT TCGCCCCCTA CATGCGGCTC 
GCCACCTACT ACGAGCGCCG GGGGCGGCTG GAGGACGCCC TCCGCAGCTA CCGCGAGGCC 
CTGCGCAGAA ACCCCCTCGA CGAGGAGCTG CAAAGAAAGG TGGGCTGGCT CGCATCCTCC 
GCCGGAAGGG AGCGGCAAGA ATAG 

 

Protein sequence

MRKMEGLLKH ARSRRLLPTL ALAALALSAG WMGAWGAGYF VAVWGPVALL LAALALALSL 
AGVPPGRGAA RAALGLLAAY TLWTFASVLW AANKGDAWAG AGKTAVYLLA FWVAAALVGA 
GASRRWALAA SVLGPAAVAA LTLPVLPESM GQMFHANRLL GTVNYYNGEA ALLLVPFWVA 
VYLGGSRQAH PLLRGAVLAG AALSAQLAVL TQSRGAMFAM AASLPVFFLL SGKRLRGLLA 
LAAPAAAVSL SFPELNRVYL EFLNEGSPRE ALQAALPEVW LLAAGAGLYG LAWGAADAVW 
SVDRRVVRAA GAVALAAALV GGAAGALAAV QRVGDPVAWA GEKWEAFRTN DTAGQEQSRY 
LSVSGSGRYT LWRVAWEDFA RRPVLGVGTH NYEATYYRLR EQAVGYVRQP HSLPLEVLAE 
RGVVGGALLA GFLAVCVGAG LRERFGSLGG EGRAQVGALA AAVAYWFVHS SAEWFWQMPG 
VTLPAFLYLA LLASPWRVAR PSPLRWPLRA AAAAVALAAA AAVAPLYLAD RAEAQSHGLR 
DPREALAAVE RAQSLNPWDP RLREREAELA MQAGQWERAE RAYREAIELN PRHFAPYMRL 
ATYYERRGRL EDALRSYREA LRRNPLDEEL QRKVGWLASS AGRERQE