| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0552 |
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| Symbol | |
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| ID | 4116168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 580929 |
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| End bp | 582101 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035340 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_643338 |
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| Protein GI | 108803401 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.133728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGATCA GCGAAGTCGA GACCTTCGTG GTGGGGACGG AGTGGCGCAA CCTCACCATC
GTGCGGCTGA GCACCGACGA GGGGCTCACG GGCCTGGGCG AGGCGCGGAT GGTCAACCAC
ACCGAGGCGC TCTTGGGCTA CATCCGGGAG GCCGCCGGGC GGCACATAAT CGGGCACGAC
CCCTTCCGGA TAGAGGAGCT CGTCCTCAAG CTCACCCGCG ACGACTTCTC GCGGCCGGGG
GAGGTCTTGA GCTCGGGGCT CGCCTGCTTC GAGATGGCCT GCTGGGACAT CGTGGGCAAG
GCGCTCGGGC GCCCGGTCTA CGACCTGCTG GGCGGACCCG TGCGCGAGAG GATAAAGGCC
TACGCCAACG GCTGGTACCG GGTGGAGAGG GAGCCGGAGG AGTTCTACGC GGCGGCCCGG
CGGGTGGTGG AGCGGGGCTA CAGGGCGCTC AAGGTGGACC CCTTCGGCCC CGGCTACTAC
GAGCTGGAGC GGGAGGAGAA GCTGCGGGCG GTGGCGCTCG TGGAGGCCGT GAGGGAGGCG
GTGGGGCCGC AGACGGAGAT CTTGCTGGAG ATGCACGGGC GCTTCTCCCC GGCGCAGGCG
CTGGAGATGA TCCGGCTGCT CGAGCCCTAC GGGCTGGGGT GGGCGGAGGA GCCGGTGCCC
CCCACCAACC TCAAGGCGCT CAAGAAGGTC TCCGAGAGGG TCCCGGCGGG GATACCGGTC
GCGACCGGGG AGCGCATCCA CCAGAGGGGC GAGTACCGGG AGCTCTTCGA GCTGCAGGCC
GCCGACGTCA TCCAGCCGGA CATAAGCCAC ATCGGGGGGC TGCTGGAGAC CAAGAAGCTC
GCCGCGTGGG CCGACGCCTG CTACGTGACG GTCGCCCCGC ACAACGTGGG CGGCCAGATC
GGCACGGCCG CGGCGCTGCA CCTGGCCGCC TGCACCACGA ACTTCCGCAT CCAGGAGTAC
TTCAACGACT TCGCCGACCC CTGGCTAAAG CGGGTCGCCC CCGGGCTGCC GGAGGTAGAG
GACGGCTGCT TCCCCCTGCC GCGGGGGCCG GGGCTGGGGG TGGAGCTCGA CGAAGAGGTG
GTGGAGGCGC ACCCCAAGCA GGACGTGCAC TTCAACCTGT TCGCCGAGGG CTGGGAGAAG
CGCGAGGCGC GGCGCGGAAG GGGGGCCGGG TAG
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| Protein sequence | MRISEVETFV VGTEWRNLTI VRLSTDEGLT GLGEARMVNH TEALLGYIRE AAGRHIIGHD
PFRIEELVLK LTRDDFSRPG EVLSSGLACF EMACWDIVGK ALGRPVYDLL GGPVRERIKA
YANGWYRVER EPEEFYAAAR RVVERGYRAL KVDPFGPGYY ELEREEKLRA VALVEAVREA
VGPQTEILLE MHGRFSPAQA LEMIRLLEPY GLGWAEEPVP PTNLKALKKV SERVPAGIPV
ATGERIHQRG EYRELFELQA ADVIQPDISH IGGLLETKKL AAWADACYVT VAPHNVGGQI
GTAAALHLAA CTTNFRIQEY FNDFADPWLK RVAPGLPEVE DGCFPLPRGP GLGVELDEEV
VEAHPKQDVH FNLFAEGWEK REARRGRGAG
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