| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0550 |
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| Symbol | |
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| ID | 4116166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 578974 |
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| End bp | 580068 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638035338 |
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| Product | hypothetical protein |
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| Protein accession | YP_643336 |
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| Protein GI | 108803399 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0452037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCAT CTTCTTCTGG CGGGCTTGGC GGCTACCGGC TGGGGCGGCG GGAGTTCCTC
GCGGCGGGGG CCCTTGCGGG GGCGGGGCTC CTGCTCGGGG GTTGCAGGAG GGCCGAGGAG
GCGGGCCAGC AGGGCGGGGG CGGGGGCGTG GGGAACTTCC CCGAGACGCC CGAGTACAAC
TTCGTGTTCG TGAACCACGT CACGACGAAC CCCTTCTTCA CGCCCACGCA GTACGGCATC
GAGGACGCCA GCGCGCTGCT GGGGACCCGC TACCAGTGGA CCGGGTCCGA GACCTCGGTG
GTGCGGGAGA TGGTTGACGC GATGAACACG GCCATCTCGG GGGGTGCGGA CGGGATAGCG
GTCTCCATCG TGGACCCGGA CGCGTTCAAC GACCCCATCC GGCGGGCGCT CGACCAGGGG
ATACCCGTGG TGGCGTACAA CGCCAACGGC AAGGGGCCGG GGACCAACCC GGCGCTGGCG
TACATCGGGC AGGACCTCTT TCTCTCCGGG GTCGAGATGG GCAAGCGGAT CGTGGAGCTC
GTCGAGGAGG GTCCGGTGGC GCTGTTCATC GCCACCAAGG GCCAGCTCAA CATCCAGCCG
CGCATCGACG GGGCCATACA GGCCATCGAG GACTCCGGGG CTCCCATAGA GTACGAGGAG
ATAGAGACCG GGGCCGAGCT GCCCGAGGAG CTCAACAGGA TCGACGCGTA CTACCAGGGG
CACAAGGACG TGCGGGGGAT GTTCGCCGTG GACGCGGGCA GCACGCAGGG GGTGGCGCAG
GTCATGAAGA AGTACAACCT GCACGAGCAG GGGGTGAGGG CCGGCGGCTA CGACCTCCTG
CCCAAGACGC TGGAGATCCT GCGGGAGGGG CACATAGACT TCACCATCGA CCAGCAGCCC
TACCTGCAGG GCTTCTACCC CGTGCTGCAG CTGTACCTGT ACAAGATCTC CGGGGGGCTC
ACCGGACCGG CCGAGACCAA CACCGGGCTC AAGTTCGTCA CCCAGGAGGA CGCCGGGCAG
TACCTGGAGA CCGAGTCCCG CTACGAGGGC GACTCCGAGC GGCCGCGGCT GCTCGAGGCG
CCGGCGGCTT CGTAG
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| Protein sequence | MEPSSSGGLG GYRLGRREFL AAGALAGAGL LLGGCRRAEE AGQQGGGGGV GNFPETPEYN
FVFVNHVTTN PFFTPTQYGI EDASALLGTR YQWTGSETSV VREMVDAMNT AISGGADGIA
VSIVDPDAFN DPIRRALDQG IPVVAYNANG KGPGTNPALA YIGQDLFLSG VEMGKRIVEL
VEEGPVALFI ATKGQLNIQP RIDGAIQAIE DSGAPIEYEE IETGAELPEE LNRIDAYYQG
HKDVRGMFAV DAGSTQGVAQ VMKKYNLHEQ GVRAGGYDLL PKTLEILREG HIDFTIDQQP
YLQGFYPVLQ LYLYKISGGL TGPAETNTGL KFVTQEDAGQ YLETESRYEG DSERPRLLEA
PAAS
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