Gene Rxyl_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0547 
Symbol 
ID4116163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp575970 
End bp577172 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content71% 
IMG OID638035335 
Productmandelate racemase/muconate lactonizing-like protein 
Protein accessionYP_643333 
Protein GI108803396 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCTC CCAGGATCAC CCGGGTCGAG ACGGCCGCGA TCCGGGCGGT GGGGCCCTCG 
GTGCTGGTGA GGGTGTGGGC CGGGGACGAG CACGGCCTCG GCGAGTGCTA CCCCTCGGCC
CCGGCGGCGG GCATCCACCA CATCGTGATG AACATGGAGG AGCAGCTCCT GGGCGAGGAC
CCCCGCGACG TCGAGCGGCT CTACGAGAAA ATGCGCCGCT GGAACATCTT CACCGGAGGG
CAGGCCGGCG CGGTCATAAC CGCCCTCTCC GGCATCGAGA CGGCCCTCTG GGACCTCGCC
GGCAAGCTGC AGGGCGTCCC CGTCTACCGG CTGCTCGGCG GGGCCTTCCG GCGTCGCGTC
CGGCTCTACG CCGACTGCAA CGCCGGGACG GTGGACGCCG CCGCCCACCA CATAGAGGGC
GGGCTCTTCG AGGAGGGGAG CAACGAGGAG TACATCGCCG TGGCCCGGGA GGCGGTGGAG
AGGGGCTTCG ACGCCATAAA GCTCGACGTG GACGACATCA CCGGCCCGCT GCACCGGGAC
TTCTGGAACG GCGCGATCTC CCCGAGGGAG CACGAGGCGA TGGTCGCCCG GGTGGCCGCC
GTGCGCGAGG CGGTCGGCCC GGAGGTGGAG GTGGCCATAG ACATGCACGG CCGCTTCGAC
ATCCCCTCCT CGATCCGCTT CGCCCGCGCC ATGGAGCCCT TCGGGCTGCT CTGGCTGGAG
GAGCCCACCC CGCCGGAGAA CCTGGACGCC CTGGCAGAGG TGCGGCGCTC CACCTCCACC
CCCATCTGCG CCGGGGAGAA CGTCTACACC CGCTTCGACT TCCGGGAGCT CTTCGCCAAG
CGGGCCGTGG ACTACGTCAT GCCCGACGTG GCCAAGTGCG GGGGGCTCGC CGAGGCCAAG
CGCATCGCCA ACCTCGCCGA GCTGGACTAC ATCCCCTTCG CCCCCCACAA CGTCTCCAGC
CCCGTAGGCA CCGTCGCCGC CGCCCACGTG TGCGCCGCCG TCTCCAACTT CGCCGTGCTG
GAGTGGCACG CCATAGACAT GCCCCACTGG GAGGACTTCG TCCGCTACCC CGGCGGCCCG
GTGATCCGGG AGGGGCACAT CGAGCTCACC GAGGAGCCGG GGCTGGGGCT GGAGCTGGAC
GAGGAGGCCG CCTTCGAGCA CCGGCACGAG AAGGGCGGCG TCCCCTTCTT CGGGAGGACT
TAG
 
Protein sequence
MSAPRITRVE TAAIRAVGPS VLVRVWAGDE HGLGECYPSA PAAGIHHIVM NMEEQLLGED 
PRDVERLYEK MRRWNIFTGG QAGAVITALS GIETALWDLA GKLQGVPVYR LLGGAFRRRV
RLYADCNAGT VDAAAHHIEG GLFEEGSNEE YIAVAREAVE RGFDAIKLDV DDITGPLHRD
FWNGAISPRE HEAMVARVAA VREAVGPEVE VAIDMHGRFD IPSSIRFARA MEPFGLLWLE
EPTPPENLDA LAEVRRSTST PICAGENVYT RFDFRELFAK RAVDYVMPDV AKCGGLAEAK
RIANLAELDY IPFAPHNVSS PVGTVAAAHV CAAVSNFAVL EWHAIDMPHW EDFVRYPGGP
VIREGHIELT EEPGLGLELD EEAAFEHRHE KGGVPFFGRT