Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0547 |
Symbol | |
ID | 4116163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 575970 |
End bp | 577172 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638035335 |
Product | mandelate racemase/muconate lactonizing-like protein |
Protein accession | YP_643333 |
Protein GI | 108803396 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCTC CCAGGATCAC CCGGGTCGAG ACGGCCGCGA TCCGGGCGGT GGGGCCCTCG GTGCTGGTGA GGGTGTGGGC CGGGGACGAG CACGGCCTCG GCGAGTGCTA CCCCTCGGCC CCGGCGGCGG GCATCCACCA CATCGTGATG AACATGGAGG AGCAGCTCCT GGGCGAGGAC CCCCGCGACG TCGAGCGGCT CTACGAGAAA ATGCGCCGCT GGAACATCTT CACCGGAGGG CAGGCCGGCG CGGTCATAAC CGCCCTCTCC GGCATCGAGA CGGCCCTCTG GGACCTCGCC GGCAAGCTGC AGGGCGTCCC CGTCTACCGG CTGCTCGGCG GGGCCTTCCG GCGTCGCGTC CGGCTCTACG CCGACTGCAA CGCCGGGACG GTGGACGCCG CCGCCCACCA CATAGAGGGC GGGCTCTTCG AGGAGGGGAG CAACGAGGAG TACATCGCCG TGGCCCGGGA GGCGGTGGAG AGGGGCTTCG ACGCCATAAA GCTCGACGTG GACGACATCA CCGGCCCGCT GCACCGGGAC TTCTGGAACG GCGCGATCTC CCCGAGGGAG CACGAGGCGA TGGTCGCCCG GGTGGCCGCC GTGCGCGAGG CGGTCGGCCC GGAGGTGGAG GTGGCCATAG ACATGCACGG CCGCTTCGAC ATCCCCTCCT CGATCCGCTT CGCCCGCGCC ATGGAGCCCT TCGGGCTGCT CTGGCTGGAG GAGCCCACCC CGCCGGAGAA CCTGGACGCC CTGGCAGAGG TGCGGCGCTC CACCTCCACC CCCATCTGCG CCGGGGAGAA CGTCTACACC CGCTTCGACT TCCGGGAGCT CTTCGCCAAG CGGGCCGTGG ACTACGTCAT GCCCGACGTG GCCAAGTGCG GGGGGCTCGC CGAGGCCAAG CGCATCGCCA ACCTCGCCGA GCTGGACTAC ATCCCCTTCG CCCCCCACAA CGTCTCCAGC CCCGTAGGCA CCGTCGCCGC CGCCCACGTG TGCGCCGCCG TCTCCAACTT CGCCGTGCTG GAGTGGCACG CCATAGACAT GCCCCACTGG GAGGACTTCG TCCGCTACCC CGGCGGCCCG GTGATCCGGG AGGGGCACAT CGAGCTCACC GAGGAGCCGG GGCTGGGGCT GGAGCTGGAC GAGGAGGCCG CCTTCGAGCA CCGGCACGAG AAGGGCGGCG TCCCCTTCTT CGGGAGGACT TAG
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Protein sequence | MSAPRITRVE TAAIRAVGPS VLVRVWAGDE HGLGECYPSA PAAGIHHIVM NMEEQLLGED PRDVERLYEK MRRWNIFTGG QAGAVITALS GIETALWDLA GKLQGVPVYR LLGGAFRRRV RLYADCNAGT VDAAAHHIEG GLFEEGSNEE YIAVAREAVE RGFDAIKLDV DDITGPLHRD FWNGAISPRE HEAMVARVAA VREAVGPEVE VAIDMHGRFD IPSSIRFARA MEPFGLLWLE EPTPPENLDA LAEVRRSTST PICAGENVYT RFDFRELFAK RAVDYVMPDV AKCGGLAEAK RIANLAELDY IPFAPHNVSS PVGTVAAAHV CAAVSNFAVL EWHAIDMPHW EDFVRYPGGP VIREGHIELT EEPGLGLELD EEAAFEHRHE KGGVPFFGRT
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