Gene Rxyl_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0546 
Symbol 
ID4116162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp575052 
End bp575945 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content73% 
IMG OID638035334 
Productbeta-lactamase-like protein 
Protein accessionYP_643332 
Protein GI108803395 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.858223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGATCC TGCCGGGCAT CCACCGGATA GAGTCCGACC TGGGGCCCCG CTTCATGTGC 
CAGTACCTGC TCCTCGGGGA GGAGCGGCGG GTGCTCGTGG ACACCGGGAT AGCGAAGACC
CCCGGAGAGG CCATAGCCCC CTACCTGGAG GGGCTGGGCC TCGGCGTGGG GGATCTGGAC
GAGGTCATCA TAAGCCACGC CGACCTCGAC CACTGCGGGG GCAACCGCGC CCTCAAGCGG
GAGAACCCGG GCCTGAGGAT CTCCTGCGGG GAGCCCGACC GGCCCTACGT CGAGCGCAAC
CGGACGATGC TCGCCGAGCT CTACTGCTGG ACGGAACCCT ACGGCTTCGG GCCCGACGAG
GCGGCCAAGG AGCGCATCCT GGAGGACCTC GGGGGCGACT GCCCGGTCGA CGCGGGGCTG
CGCGGCGGGG AGACCCTCCG GCTCGGCCCC GGCTGGCGGA TCGAGGTGCT GCACCTGCCC
GGCCACACCC CCGGGCACCT CGGCCTCTGG GACGCGCGCA GCGGGGCGGC GATCATCATC
GACGCGGCGC TGGAGAGCGG CATCTACGAC CGGGAGGGGA ACCGCCTCAT CCCCCCGCGC
TACTTCGACG CCGCCGCCTA CGAGCGCACC CTGCGCTCCC TGCTCGCCCT GCGGCCGCGC
CACCTGCTCA CCGCCCACTA CCCCCCGATG GGGGAGCGGG AGGCCGAGGA GTTCCTCCGG
CGGTCGCTGG AGTTCGTGGG GAGGATGCGA AGCCTCGTCC GCGCCGCCCT GCGGGAGGGG
ACGACCGGCC TCAAGGAGCT CACCGCCCGC GCCGACGCCG GGCTCGGCCC CTACCCCCAG
TCGGCCTTCG AGCTCGCCGC GGGGGTGAGG GCGCACCTGT CCGAGCTCTA CTGA
 
Protein sequence
MEILPGIHRI ESDLGPRFMC QYLLLGEERR VLVDTGIAKT PGEAIAPYLE GLGLGVGDLD 
EVIISHADLD HCGGNRALKR ENPGLRISCG EPDRPYVERN RTMLAELYCW TEPYGFGPDE
AAKERILEDL GGDCPVDAGL RGGETLRLGP GWRIEVLHLP GHTPGHLGLW DARSGAAIII
DAALESGIYD REGNRLIPPR YFDAAAYERT LRSLLALRPR HLLTAHYPPM GEREAEEFLR
RSLEFVGRMR SLVRAALREG TTGLKELTAR ADAGLGPYPQ SAFELAAGVR AHLSELY