Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0531 |
Symbol | |
ID | 4116303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 560781 |
End bp | 561533 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638035319 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_643317 |
Protein GI | 108803380 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.147758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAGCGC TTGACGGAAA GGTCGCGGTG GTAACCGGCG GGGGCGGCGG GCTCGGCGAG GGCATCTGTG CCGGGCTCGC CGCCGCCGGG GCCGCCGTGG CCGCGGTGGA CGTGGACCTG GAGAAGGCGC GGCGGGTGGA GCGGCTCGTC GCCGGCAGGG GCGGGCGCTG CGTGGCCGTC GAGGCCGACG TCTCCAGCCG CCGCTCCGTG GAGCGCATGG CGGAGCGGGT CGCCGGCGAG CTGGGGGGCA TAGACATCCT GGTCAACAAC GCCGCCATCT ACCCTCTGCG TCCCTGGACC GAGATAGACG AGGAGGAGTG GGACCGGGTG CTCGCGGTCA ACATCAAGGG GTACTTCCTG TGCGCCCGGG CCGCCTACCC GTACATGAGG GAGCGGGGGG GAGGGAGGAT CATCAACGTC GCCTCCATAA CCTTCTTCAT CGGCTGGGCG GGCTTTCTGG ACTACGTCTC CTCCAAGGGG GCGGTTGTGG GCTTCACCCG CACGCTGGCC CGGGAGGTGG GTCCCGAGGG GATCACGGTG AACGCCGTCT CCCCCGGGGC CTTCCCCACC GACGCCGAGC GGGTTCACCC CGACCAGGAG GCCCTCAACC GCCGGATCCT CGACGCCCAG TGCATAAAGC GCCGGGGGAA GCCGGAGGAC GTGGGCAACC TGGTGACGTT TCTGGCCAGC GAGGAGGCCT CCTTCATCAC CGGGCAGACC ATAGAGATCG ACGGCGGATG GGCGATGCAC TGA
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Protein sequence | MAALDGKVAV VTGGGGGLGE GICAGLAAAG AAVAAVDVDL EKARRVERLV AGRGGRCVAV EADVSSRRSV ERMAERVAGE LGGIDILVNN AAIYPLRPWT EIDEEEWDRV LAVNIKGYFL CARAAYPYMR ERGGGRIINV ASITFFIGWA GFLDYVSSKG AVVGFTRTLA REVGPEGITV NAVSPGAFPT DAERVHPDQE ALNRRILDAQ CIKRRGKPED VGNLVTFLAS EEASFITGQT IEIDGGWAMH
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