| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0531 |
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| Symbol | |
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| ID | 4116303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 560781 |
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| End bp | 561533 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035319 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_643317 |
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| Protein GI | 108803380 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.147758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGCGC TTGACGGAAA GGTCGCGGTG GTAACCGGCG GGGGCGGCGG GCTCGGCGAG
GGCATCTGTG CCGGGCTCGC CGCCGCCGGG GCCGCCGTGG CCGCGGTGGA CGTGGACCTG
GAGAAGGCGC GGCGGGTGGA GCGGCTCGTC GCCGGCAGGG GCGGGCGCTG CGTGGCCGTC
GAGGCCGACG TCTCCAGCCG CCGCTCCGTG GAGCGCATGG CGGAGCGGGT CGCCGGCGAG
CTGGGGGGCA TAGACATCCT GGTCAACAAC GCCGCCATCT ACCCTCTGCG TCCCTGGACC
GAGATAGACG AGGAGGAGTG GGACCGGGTG CTCGCGGTCA ACATCAAGGG GTACTTCCTG
TGCGCCCGGG CCGCCTACCC GTACATGAGG GAGCGGGGGG GAGGGAGGAT CATCAACGTC
GCCTCCATAA CCTTCTTCAT CGGCTGGGCG GGCTTTCTGG ACTACGTCTC CTCCAAGGGG
GCGGTTGTGG GCTTCACCCG CACGCTGGCC CGGGAGGTGG GTCCCGAGGG GATCACGGTG
AACGCCGTCT CCCCCGGGGC CTTCCCCACC GACGCCGAGC GGGTTCACCC CGACCAGGAG
GCCCTCAACC GCCGGATCCT CGACGCCCAG TGCATAAAGC GCCGGGGGAA GCCGGAGGAC
GTGGGCAACC TGGTGACGTT TCTGGCCAGC GAGGAGGCCT CCTTCATCAC CGGGCAGACC
ATAGAGATCG ACGGCGGATG GGCGATGCAC TGA
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| Protein sequence | MAALDGKVAV VTGGGGGLGE GICAGLAAAG AAVAAVDVDL EKARRVERLV AGRGGRCVAV
EADVSSRRSV ERMAERVAGE LGGIDILVNN AAIYPLRPWT EIDEEEWDRV LAVNIKGYFL
CARAAYPYMR ERGGGRIINV ASITFFIGWA GFLDYVSSKG AVVGFTRTLA REVGPEGITV
NAVSPGAFPT DAERVHPDQE ALNRRILDAQ CIKRRGKPED VGNLVTFLAS EEASFITGQT
IEIDGGWAMH
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