Gene Rxyl_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0527 
Symbol 
ID4116299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp557027 
End bp557785 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content74% 
IMG OID638035315 
ProductGntR family transcriptional regulator 
Protein accessionYP_643313 
Protein GI108803376 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000211713 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGACGG GTGGCTCCGG CCGGGAGAGG CGACTGCGGC CCCCCAGGCT CTCCGTGGGG 
CTGGCGGAGC GGCTGCGGGG CCGGATACTG GGGGGCGAGT TCGGGCCGGG AGAGCGGCTG
CCGGGGAACC GGGAGCTCGC CGCCGCCTAC TCGGTGAGCG TGGGGTCGGT GCGGGAGGCC
CTACAGAGGC TTGCTTCGGA GGGCCTGGTG GAGGTGCGTC CGGGCAGCGG GACCTACGTC
TCGCGGGATC TGCGGGGCTC CCCCTGGCTG CCGGGTGGGG AGCAGCCTCT TCTGGACAGG
GAGCAGGTCG AGGAGCTGAT AGAGGCCCGG GAGGTGCTCG AGCCCCGTCT TGCGGAGCTG
GCCGCGCGGA GGGCGTCCGC GGAGCAGGTC GAGGGGCTGT GGCGGGCGCT CGAGCGGATG
CAGGAGAGCG TCTCGGACCC TTCGGCCTTC GCGGAGGCCG ACGTGGGGTT TCACATGGCC
GTTGCGGAGG CCTCCGGCAA CCGCTTCCTG ACGCGGGCCA CGGCGGACAT CCGGTCGCTG
CTCCGCCGGG ACATGGAGCT CAGCGCCGAG GTCGGCATCC GGCGGGCCGG GACGCTGCAG
TTCAGCGTCG ACTCCCACCG CCGGCTCGTG GCGGCGATAG CGGCGGGGGA TCCCGAGAAG
GCGGGCCGGA TCGTGTCCGG CATCCTCCGG CGCAACCGGG GGTTCGTGAT CGGCCTCTAC
TCCGGCGGGG TCTCCGCCGA GGGGTCCGGG GAGTTCTAG
 
Protein sequence
MSTGGSGRER RLRPPRLSVG LAERLRGRIL GGEFGPGERL PGNRELAAAY SVSVGSVREA 
LQRLASEGLV EVRPGSGTYV SRDLRGSPWL PGGEQPLLDR EQVEELIEAR EVLEPRLAEL
AARRASAEQV EGLWRALERM QESVSDPSAF AEADVGFHMA VAEASGNRFL TRATADIRSL
LRRDMELSAE VGIRRAGTLQ FSVDSHRRLV AAIAAGDPEK AGRIVSGILR RNRGFVIGLY
SGGVSAEGSG EF