Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0527 |
Symbol | |
ID | 4116299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 557027 |
End bp | 557785 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638035315 |
Product | GntR family transcriptional regulator |
Protein accession | YP_643313 |
Protein GI | 108803376 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000211713 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCGACGG GTGGCTCCGG CCGGGAGAGG CGACTGCGGC CCCCCAGGCT CTCCGTGGGG CTGGCGGAGC GGCTGCGGGG CCGGATACTG GGGGGCGAGT TCGGGCCGGG AGAGCGGCTG CCGGGGAACC GGGAGCTCGC CGCCGCCTAC TCGGTGAGCG TGGGGTCGGT GCGGGAGGCC CTACAGAGGC TTGCTTCGGA GGGCCTGGTG GAGGTGCGTC CGGGCAGCGG GACCTACGTC TCGCGGGATC TGCGGGGCTC CCCCTGGCTG CCGGGTGGGG AGCAGCCTCT TCTGGACAGG GAGCAGGTCG AGGAGCTGAT AGAGGCCCGG GAGGTGCTCG AGCCCCGTCT TGCGGAGCTG GCCGCGCGGA GGGCGTCCGC GGAGCAGGTC GAGGGGCTGT GGCGGGCGCT CGAGCGGATG CAGGAGAGCG TCTCGGACCC TTCGGCCTTC GCGGAGGCCG ACGTGGGGTT TCACATGGCC GTTGCGGAGG CCTCCGGCAA CCGCTTCCTG ACGCGGGCCA CGGCGGACAT CCGGTCGCTG CTCCGCCGGG ACATGGAGCT CAGCGCCGAG GTCGGCATCC GGCGGGCCGG GACGCTGCAG TTCAGCGTCG ACTCCCACCG CCGGCTCGTG GCGGCGATAG CGGCGGGGGA TCCCGAGAAG GCGGGCCGGA TCGTGTCCGG CATCCTCCGG CGCAACCGGG GGTTCGTGAT CGGCCTCTAC TCCGGCGGGG TCTCCGCCGA GGGGTCCGGG GAGTTCTAG
|
Protein sequence | MSTGGSGRER RLRPPRLSVG LAERLRGRIL GGEFGPGERL PGNRELAAAY SVSVGSVREA LQRLASEGLV EVRPGSGTYV SRDLRGSPWL PGGEQPLLDR EQVEELIEAR EVLEPRLAEL AARRASAEQV EGLWRALERM QESVSDPSAF AEADVGFHMA VAEASGNRFL TRATADIRSL LRRDMELSAE VGIRRAGTLQ FSVDSHRRLV AAIAAGDPEK AGRIVSGILR RNRGFVIGLY SGGVSAEGSG EF
|
| |