Gene Rxyl_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0502 
Symbol 
ID4116761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp537013 
End bp537747 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content65% 
IMG OID638035290 
ProductABC transporter related 
Protein accessionYP_643288 
Protein GI108803351 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCA TAGAGTTCCG CAACGTGAGC AAGTCCTTCG GGGACTTCGA GGTCCTCAAG 
GGCATAGACT TCTCCGTGGA GGAGGGCGAG GTGGTGGTCA TCATAGGGCC CTCCGGGTCG
GGGAAGAGCA CCCTCCTGCG GTGCATCAAC GCGCTGGAGG GCATCTCCTC CGGCGAGCTC
ATCGTGGACG GCATCCGGGT GCACGACAGA AAGGCCGACC TGAACCGGCT GCGCACCGAG
ATAGGGTTCG TCTTCCAGCA GTTCAACCTC TACCCGCACA TGACGGTCGC CGAGAACGTC
ATGCTCGCCC CGATGAAGGT GCGGAAGCTC TCCCGCAAGG AGGCCGAGGA GCGGTGCATG
CGGCTGCTCG AGCGGGTGGG GATCCCGGAG CAGGCCGGCA AGTACCCGGA GAACCTCTCC
GGCGGCCAGC AGCAGCGGGT GGCCATAGCG CGGGCGCTGG CGATGGAGCC CAAGATCATG
CTCTTCGACG AGCCCACGAG CGCCCTGGAC CCGGAGATGA TCAACGAGGT GCTCGAGGTG
ATGGTGGACC TGGCCCGCGG CGGGATGACG ATGGTGGTCG TCACCCACGA GATGGGCTTC
GCCCGGCGCG TGGCCGACCG GGTGGTCTTT ATGGACGAGG GCCGCATCCT GGAGGAGGGC
CCCCCGGAGC ACTTCTTCGA GAACCCGGAG AACGAGCGCA CCAAGAGGTT TCTGGACCGC
ATCCTGCACA TGTAG
 
Protein sequence
MSIIEFRNVS KSFGDFEVLK GIDFSVEEGE VVVIIGPSGS GKSTLLRCIN ALEGISSGEL 
IVDGIRVHDR KADLNRLRTE IGFVFQQFNL YPHMTVAENV MLAPMKVRKL SRKEAEERCM
RLLERVGIPE QAGKYPENLS GGQQQRVAIA RALAMEPKIM LFDEPTSALD PEMINEVLEV
MVDLARGGMT MVVVTHEMGF ARRVADRVVF MDEGRILEEG PPEHFFENPE NERTKRFLDR
ILHM