Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0502 |
Symbol | |
ID | 4116761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 537013 |
End bp | 537747 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638035290 |
Product | ABC transporter related |
Protein accession | YP_643288 |
Protein GI | 108803351 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCA TAGAGTTCCG CAACGTGAGC AAGTCCTTCG GGGACTTCGA GGTCCTCAAG GGCATAGACT TCTCCGTGGA GGAGGGCGAG GTGGTGGTCA TCATAGGGCC CTCCGGGTCG GGGAAGAGCA CCCTCCTGCG GTGCATCAAC GCGCTGGAGG GCATCTCCTC CGGCGAGCTC ATCGTGGACG GCATCCGGGT GCACGACAGA AAGGCCGACC TGAACCGGCT GCGCACCGAG ATAGGGTTCG TCTTCCAGCA GTTCAACCTC TACCCGCACA TGACGGTCGC CGAGAACGTC ATGCTCGCCC CGATGAAGGT GCGGAAGCTC TCCCGCAAGG AGGCCGAGGA GCGGTGCATG CGGCTGCTCG AGCGGGTGGG GATCCCGGAG CAGGCCGGCA AGTACCCGGA GAACCTCTCC GGCGGCCAGC AGCAGCGGGT GGCCATAGCG CGGGCGCTGG CGATGGAGCC CAAGATCATG CTCTTCGACG AGCCCACGAG CGCCCTGGAC CCGGAGATGA TCAACGAGGT GCTCGAGGTG ATGGTGGACC TGGCCCGCGG CGGGATGACG ATGGTGGTCG TCACCCACGA GATGGGCTTC GCCCGGCGCG TGGCCGACCG GGTGGTCTTT ATGGACGAGG GCCGCATCCT GGAGGAGGGC CCCCCGGAGC ACTTCTTCGA GAACCCGGAG AACGAGCGCA CCAAGAGGTT TCTGGACCGC ATCCTGCACA TGTAG
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Protein sequence | MSIIEFRNVS KSFGDFEVLK GIDFSVEEGE VVVIIGPSGS GKSTLLRCIN ALEGISSGEL IVDGIRVHDR KADLNRLRTE IGFVFQQFNL YPHMTVAENV MLAPMKVRKL SRKEAEERCM RLLERVGIPE QAGKYPENLS GGQQQRVAIA RALAMEPKIM LFDEPTSALD PEMINEVLEV MVDLARGGMT MVVVTHEMGF ARRVADRVVF MDEGRILEEG PPEHFFENPE NERTKRFLDR ILHM
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