| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0478 |
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| Symbol | |
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| ID | 4114663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 514403 |
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| End bp | 515431 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 638035266 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_643264 |
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| Protein GI | 108803327 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.262897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTCT ACACGCACCC CGCCTGCCGG AAGCACCTGA ACCCCAGCTC CGGGGTGGAG
GTCCCGGAGC GCTACCCGGC GGCGCTCGCC GGGGCCGAGG CCGCCGCCCG GGACGGCGCG
CCGGTCGAGG TGCGCCGCTC CGAGCCGGCC CCGGAGGCCG CGCTCCTCGC GGTGCACGAG
CGGGGCTACC TGAAGCTGCT GCGCGAGCTC TCGTCCTCCG GGGGCGGCGT GCTGGACCCG
GACACCGCGC TCGGGCCGGG CTCCTGGGAG GCGGCGCTGC TCGCCGCCGG GGCCGCCGCC
GGCGCCGCGG AGGCCGCGCT CTCGGGCGCG GCCTCCTTCG CCCTCGTGCG CCCGCCGGGG
CACCACGCCG GGCGGGGGAG GGCCATGGGC TTCTGCCTCA TCAACAACGC CGCCGTCGCC
GCCGCCCACG CCCGCGCGCT CGGGGCGCGG CGGGTGGCCG TCCTCGACTG GGACGTCCAC
CACGGCAACG GCACCCAGGA GATCTTCTAC GCCGCGGGCG ACGTCCTCTA CCTCTCGGTG
CACCGGGGCG GGCTCTTCTA CCCGGGCACG GGGCACCCGG AGGAGGTGGG CGCTGGCCCG
GGAAAGGGCT TCACCGTGAA CGTGCCGCTC CCGGCCGGCT CCGGGGAGGG GGGGTACGCG
GCGGCCTTCG GGGGGGTGCT CCTTCCCGTG CTCGAGGAGT TCGCGCCGGA GCTCGTCGTG
GTCTCGGCGG GGTACGACGC CCACGCCTCG GACCCCCTCG GCGGCATGCG GCTCGAGGCC
GGCTCCTTCG GGCGCTTCGC CGCGGCGGTG GCCTCCCTCG CGCGGCGCGC CTCGGGAACC
CCTCCGGCCT TCGTGCTGGA GGGCGGCTAC GAGGCGGGGG CGCTCACCGC CTGCGTCGCC
GCCACCATCC GGGGGGCCGG GGAGGGGGAG ACCGGAGGGG AGCCCTGGCC CGCGGAGGGG
CGGGGGGATC TCCTCGGGCC TCCCCGCAGG GCCCTCGCCC CCTACTGGGA GAGCCTGCGG
GGAGGTTAG
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| Protein sequence | MLVYTHPACR KHLNPSSGVE VPERYPAALA GAEAAARDGA PVEVRRSEPA PEAALLAVHE
RGYLKLLREL SSSGGGVLDP DTALGPGSWE AALLAAGAAA GAAEAALSGA ASFALVRPPG
HHAGRGRAMG FCLINNAAVA AAHARALGAR RVAVLDWDVH HGNGTQEIFY AAGDVLYLSV
HRGGLFYPGT GHPEEVGAGP GKGFTVNVPL PAGSGEGGYA AAFGGVLLPV LEEFAPELVV
VSAGYDAHAS DPLGGMRLEA GSFGRFAAAV ASLARRASGT PPAFVLEGGY EAGALTACVA
ATIRGAGEGE TGGEPWPAEG RGDLLGPPRR ALAPYWESLR GG
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