| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0468 |
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| Symbol | |
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| ID | 4116435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 503202 |
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| End bp | 504518 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035256 |
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| Product | amidase |
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| Protein accession | YP_643254 |
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| Protein GI | 108803317 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0410275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGC GGGGCCAGAC GCCGGCCTTC CGGACGAGTT CTGGTGCTGG CCGGCGGTGG
AGCTCGCGCG CGGCATCAGG ACGCGCCGGA TCTCCTCGCG GGAGGCGGTG GAGTCTCAAC
AGCGACCAGG CCGGACACGC CACCACCAAC GGCGTGGTGG CCTTCAAGGA CAACGTTGCG
AACGCCGACG ACCCGCACGT CAGGAAGCTG CGCGAGGCCG GGGCCGTGTT CGTGGGGCGC
AGCAACACCC CGGCGTTCTC CTACCGCTGG TTCACGGACA ACGACCTGCA CGGGCGCACG
CTCAACCCCT GGGATGCGGG CCGGACGCCC GGGGGATCGA GCGGTGGCGC GGCATCTGCG
GTAGCGAGCG GCATGGTGCC CGTGGCCCAC GGCAACGACA TCGGCGGTTC GATCCGCTAC
CCCGCCTACG CCTGCGGCGT CGCAGGCATC AGGCCGACGG TGGGGCGCGT GCCGGGCTGG
TACGGTCCTG TAGATGCCGA CGAGGCGTTG TCCGTGCAGA GCATGCTGGT GCAGGGGCCA
CTGGCGCGCA CAGTGGAGGA CCTGCGGCTC GCGCTCGACG CCATGAGCGG CTTCGACGCG
CGCGACCCCT TCGCGGTGCC CGTGTTGCCG GCGAGCGCCA ACGAGCCGCT GCCCCGCCCG
GTCAGGGTGG GCCTTTTGCG CGACGTGGGC GTCGCCGCCC CGCAGCCGGC GGTGAACGAG
GCGTTGGATC TGGCCGCCGG ATGGCTCGGG GAGGCCGGCT ACGTGGTCGA GGAGGTGGAG
CTCCCGCTGC TCGCGGAGGC CTACCGGCTG TGGTATCTGC TGTGCATGGA GGAGTTTCGC
CTGGTCATGC CGCTCGTCGA GGAGATGGGC GACGAGGGGA TGAAGCGCGC CGCCGCGACC
TACTACGCGG CGGCCAAAGA GTGGTGGGGG GAGAGCCCCG GCCTCGAGGA CTACATGAAC
GGCTACGCGC GGCGCGGGAC GCTCATCGGG CGCCTGCAGG CCTTCATGCA GGAGTACCCG
CTGGTGCTGT TGCCCGTCTC CGCCGAGCAG GCGTTCGAGT ACGACGCGGA CATCGCGAGC
CTCCAGAGGG GCCTGCAGGT CGTGGCCGCG CAGTGGTCGA TGATGGCCAT CCCGCTGCTC
GGCTTCCCGG CGATCTCCGT ACCTACCGGC GTCGCGGACG GGCTGCCGGT GGGCGTGCAG
CTCATGGGAA GGCGGTTCCG CGAGGACGCC ATCTTCGACG CGGCGGAGGT CATCGAGGCC
CGCGCCGGCG TGTTTGCGCC GGTGGACGCG CAGAGCGAGC TCGGCGCTTC CCGGTGA
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| Protein sequence | MKLRGQTPAF RTSSGAGRRW SSRAASGRAG SPRGRRWSLN SDQAGHATTN GVVAFKDNVA
NADDPHVRKL REAGAVFVGR SNTPAFSYRW FTDNDLHGRT LNPWDAGRTP GGSSGGAASA
VASGMVPVAH GNDIGGSIRY PAYACGVAGI RPTVGRVPGW YGPVDADEAL SVQSMLVQGP
LARTVEDLRL ALDAMSGFDA RDPFAVPVLP ASANEPLPRP VRVGLLRDVG VAAPQPAVNE
ALDLAAGWLG EAGYVVEEVE LPLLAEAYRL WYLLCMEEFR LVMPLVEEMG DEGMKRAAAT
YYAAAKEWWG ESPGLEDYMN GYARRGTLIG RLQAFMQEYP LVLLPVSAEQ AFEYDADIAS
LQRGLQVVAA QWSMMAIPLL GFPAISVPTG VADGLPVGVQ LMGRRFREDA IFDAAEVIEA
RAGVFAPVDA QSELGASR
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