Gene Rxyl_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0465 
Symbol 
ID4116432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp499478 
End bp500284 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content67% 
IMG OID638035253 
ProductIclR family transcriptional regulator 
Protein accessionYP_643251 
Protein GI108803314 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0093222 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACCG CCAGAACGGA CGACCGCAAC AGGAACCGGC CGGGCACCAG ATCCGGGACC 
TCAGCGCTGA GGCACGGGAT CCGGGTCCTC CAGACCTTCA CCAGGGAGGA GCCGATCCTG
GGCGTCAGCG AGATCGCACG CCGCGTCGGC CTGCACAAGA GCACCGTCTC CCGCATCCTG
GCGACGCTCG AAGAGGCCAT GCTCGTCGAA CGCCACCCGA CCAGCGGCCG CTTCCGCCTC
GGGGTGGGCG TTATAGCGCT GGCCGGCCCG ATGCTTGCAA ACCTCGACGT GCGCCGCGTC
GCCAGACCCT TTCTCGAAGA GCTCACCCGG GCGACCGGAG AGACCACCGG CCTCCTGGTG
TGGAGCGAGG GGGCGGCCAT AAGCGTGGAG CAGGTCGCGA GCCCCAAAAC GGTGAAGCAC
ACCATCCCGA TCGGAACCCA GTTCCGCGAA CACGCCAGCG CCTCCGTGAA GGTGTTTCTG
GCCGAATCAC CGCCCGAGGA AGTACAGAAG GTCCTCGACC GGGGGCTCAA ACGCTACTCG
GAACGTACCG TGGTAGACCC GGAGGAGTAC CTGAAGGGCC TGCAGCGCGT CAGGGAGCTC
GGCTACGCTG TGAACGCCGG AGAGACCTCC CTGGAGGAAA CCGGAATCGC CGCGCCGGTC
AGGGATCATC GCGACCAAAC GGTGGCCGCC GTCCTGCTCT CCGCACCGTA CTACCGGACC
CCCCCAGAAC GCATCGAGGA GCTCGGAGAG CTGGTCAGAA AGACCGCAGA AGCCATCTCA
AAGCGCCTGG GCGGCGCGAG CGCGTGA
 
Protein sequence
METARTDDRN RNRPGTRSGT SALRHGIRVL QTFTREEPIL GVSEIARRVG LHKSTVSRIL 
ATLEEAMLVE RHPTSGRFRL GVGVIALAGP MLANLDVRRV ARPFLEELTR ATGETTGLLV
WSEGAAISVE QVASPKTVKH TIPIGTQFRE HASASVKVFL AESPPEEVQK VLDRGLKRYS
ERTVVDPEEY LKGLQRVREL GYAVNAGETS LEETGIAAPV RDHRDQTVAA VLLSAPYYRT
PPERIEELGE LVRKTAEAIS KRLGGASA