| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0448 |
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| Symbol | |
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| ID | 4116610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 479590 |
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| End bp | 482457 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638035236 |
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| Product | SMC protein-like protein |
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| Protein accession | YP_643234 |
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| Protein GI | 108803297 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.507994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCTCA AGCGCCTCTA CCTCGAGAAC TACAAGCAGT TCCGCGACCC GCTGGAGCTC
CTCCCCCCCG AGGGGGCCAT CGGGGTGGTC GGGGCCAACG GCGCGGGGAA GACCACGCTG
TTCGAGGCGA TACTCTGGGC CTTCTTCGGC TCCCGGGGCA CCGACGCGCG CTTCGCCAAC
GATTCGATCC CCTGGAGCGG CGGCTCGGCC TCCGACCGCT CGGCGGTCGA GGTCACGCTC
GAGGTCGGCG GGACCTCCTA CAGGGTGGAG CGCTCGCTGC GCCGGGGCCG GACGGAGGCC
CGCGTCTGCC GGGAGCCGGA CGAGGAGCTC GTCGGCGGCC CCTCGGAGGT GAAGAGGTGG
GTGCAGGAGC ACCTGCTCGG GATGGACCGC ACCGCCTTTG AGGCCACCTT CTTCGCCCGG
CAGAAGGAGC TGGAGTTCTT CGCCGAAACG ACCGGGGTCG AGCGGCGGCG GAAGATCGCG
CAGCTGCTCG GGATAAGCCG GGTGGAGGAG GCCCAGAAGC TGCTGCGGGA GGACAGAAGA
GCCGCCGAGA ACCTGCGCAG GGCGCTGGAG GGGGTCCTGG AGGGGACGGA CGCGGAGGCG
CTGGAGCGGG AGATCCCGGC GGCCCGCGCG AGGCGGGACG AGGCCCGCTC CCGCAAAGAC
GCCGCGCAGA GGGAGCTGGA GGAGCGCGAG CGGGAGCTCG CCTCCGCGCG GGCGGAGGCG
GAGAGGGCGG AGGCGCTCTA CCGGAGCGTC ACGGACCTCG AGAGGCGGCT GGACGCCGCC
GCGGCGGAGC GGGAGCGCGC CGGAGAGCGG GCCGACCGGC TGCGGGAGCA CCTGGGGTCC
CTGGAGGAGG ACGAGCGGAA GGCCAGGGAG CTGGAGCCCC GCACTCTGGG GCTCGCCGGG
GTGGAGAGGG AGATCTCCGC GCTCGAGGAG GCCAGGGACC GCGAGAGGCG GCGCGAGATG
GCCCGCGAGG AGATGCAGCG GCTCCGCCGC TCCGCCCACG ACGCCCTGAT GGAGGCCTGC
GACCTGCTGG AGGAGCTGGA CGGGGAGGAG CCGCCGCTCC CCGGCTGGGG CGGCCTCTTC
GGGGTGGAGG ACGAAGCCGC GAGGCTCCGG GAGGCCGTGC GGCTGCTCGG GGAGGCGGAG
GACGCCCGCC GGCGCGCCGA GCTGCGCCTC AAGGACCTCC GGGAGGCGGC GGAGCTGCAC
GGCAGGCTGG CCGAGCTCCG GGGCGAGCTG CGGCAGCTCC GGGAGGAGCG CGAGGCCGCC
CGAGGCGAGC TGGCGCGCCT GGAGCGCGAG ATCTCCCGCT CCTCCGGCGG GGAGCCCCCG
GAGCGCCTCC TGGAGAGGCT CCGGGAGGAA GAGGGCCGGC TGCGCCAGCG GGCCGCCGGG
CGGCGGGCCC TCGCAGAGCT CGAAGAGCAG GAGGCAAGGC GGCTCTCGCA GGCCCGCCGC
CTGATAGACA CCTCCCACGA GAGGGCCGAG TGCCCGACCT GCCGGCGGGG GTTCGCCGCC
GGGGAGCACG CCGAGGTCCT GGAGACGCTG CGCGGCCAGG AAGAGGCCGC GCGCGCCCGG
GCCGCTGAGG CCCTCTCCTC CTCCCGGCGG CTGGAGGAGC GGGCCTCCGG CCTGCGGCGG
CGCATGGAGG AGGCGGGGCG CCTCCTGGAG AGGCTCCGCC TCCTGAACGA GGAGCGCCGG
CTGGCCGCGG CGCGCCTCGA GAGCCTCGAC GCCCGCCTCG GGCCGCTCGA GGAGAAGGCC
GGGGCCCTGC GCGAACGCCT CGGGCCCTCC CCCGCCCCGA CGGAGAGAGA GCTGGAGGCC
GCCGAGCGGG AGCTGGAGGC CCTGCGGCGC CTGTGCGGGG CCCGGCCCGC CCTGGAGGGC
CTGCTCTCCT CCTACGAGAA GGACTGCGCG GCCGCCGCCG AGCGCGCCAA CGAGGCCGAG
CGGCTCTCGC GCGGCCCGGC CTACGACGAG GCCGCCCACC GGCGCCTCCT GGAACGCCGG
TCGGAGATAG AGCGCCTCGG GGGCATCCTG GAGACCATCC GCGAGCGTCT CTCGCAGCGC
CCCGCGGTGG AGGAGGCCCT GCGCCGCGCG CTCGAGGAGC GGCGCAGGGC CGGGGAGCGC
GCGGCGCGGC TCCGGGAGGA GCTCTCCGCC CTGGACTTCG ACGAGGGGGC CTACCGGCGG
GCCCGGGAGC GGGCCGGGGA GGCGGAGCGC CGGCGGGACG CGGCGCGCCA GCGGCGAGAA
GAGGCGGCGG CCGAGCTGCA GGAGCTCGAG CACCGCCTGC AGACCCTCGA GGCCGATCTC
GCGCGCTACA GGGAGCACCG CCGCAAAGCC GACGAGCAGG CCGCCCTCTC CGGCGAGCTC
TCCCAGATGG ACCGCCTGCT CGGCGAGTTC CACGGCGCCC TCGCCGCCCG GCTGCGGCCG
CACCTGCAGC GCGAGGCCAG CGCGCTCATC AGCGTCCTCA CCGACGGCCG CTACAGCAGG
ATGGAGTTCG ACGACGAATA CAACATCCGC CTCTTCGACG GCCTCTCCGA CTCCTACGAG
ATCTCCCGCT TCTCCGGCGG GGAGGCGGAC ATCGCCAGCC TCTGCGCCCG GGTGGCGCTC
TCGAAGACCA TCTCCGACCG GGGCCCGGAC ACCCTGGGGT TTATCGTGCT GGACGAGGTC
TTCGGGGCCC TCGACACCGA CCGCCGCCGC AACGTCCTGC TCGCCCTCGA CCGGCTCAAG
CGGACGTTCG GCCAGATCTT CCTCATCTCA CACGTCGGCG ACATCCAGGA GTCCGCCCTG
CTGGACGAGA TGTGGCTCGT GGAGGTGGAC GGGGCCGGCA AGAGCAGCGT GCGCCGCCTG
AACGCCGCCT CGAAGCAGGT CGCGGAGATT CTCCAAAATT CTTCGTAA
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| Protein sequence | MILKRLYLEN YKQFRDPLEL LPPEGAIGVV GANGAGKTTL FEAILWAFFG SRGTDARFAN
DSIPWSGGSA SDRSAVEVTL EVGGTSYRVE RSLRRGRTEA RVCREPDEEL VGGPSEVKRW
VQEHLLGMDR TAFEATFFAR QKELEFFAET TGVERRRKIA QLLGISRVEE AQKLLREDRR
AAENLRRALE GVLEGTDAEA LEREIPAARA RRDEARSRKD AAQRELEERE RELASARAEA
ERAEALYRSV TDLERRLDAA AAERERAGER ADRLREHLGS LEEDERKARE LEPRTLGLAG
VEREISALEE ARDRERRREM AREEMQRLRR SAHDALMEAC DLLEELDGEE PPLPGWGGLF
GVEDEAARLR EAVRLLGEAE DARRRAELRL KDLREAAELH GRLAELRGEL RQLREEREAA
RGELARLERE ISRSSGGEPP ERLLERLREE EGRLRQRAAG RRALAELEEQ EARRLSQARR
LIDTSHERAE CPTCRRGFAA GEHAEVLETL RGQEEAARAR AAEALSSSRR LEERASGLRR
RMEEAGRLLE RLRLLNEERR LAAARLESLD ARLGPLEEKA GALRERLGPS PAPTERELEA
AERELEALRR LCGARPALEG LLSSYEKDCA AAAERANEAE RLSRGPAYDE AAHRRLLERR
SEIERLGGIL ETIRERLSQR PAVEEALRRA LEERRRAGER AARLREELSA LDFDEGAYRR
ARERAGEAER RRDAARQRRE EAAAELQELE HRLQTLEADL ARYREHRRKA DEQAALSGEL
SQMDRLLGEF HGALAARLRP HLQREASALI SVLTDGRYSR MEFDDEYNIR LFDGLSDSYE
ISRFSGGEAD IASLCARVAL SKTISDRGPD TLGFIVLDEV FGALDTDRRR NVLLALDRLK
RTFGQIFLIS HVGDIQESAL LDEMWLVEVD GAGKSSVRRL NAASKQVAEI LQNSS
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