Gene Rxyl_0441 details

Gene Information

• Locus tag: Rxyl_0441
• ID: 4116603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 472116
• End bp: 474092
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 638035229
• Product: Amylo-alpha-1,6-glucosidase
• Protein accession: YP_643227
• Protein GI: 108803290
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3408] Glycogen debranching enzyme

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGTTGC CGGACCGGGA GACGGAGACG CTGGAGTGGG CGGTGAGCGT GGTCTCGCCC 
GGGGCCTACG CCGTCTCGGA CGGGGCGGGG GACTTCGACG CCGGGGCCGG GGGGCTCTAC 
TACCGGGACA CGCGGCACCT CTCGCGGTTC GTGCTGGAGG TGGGGGGAGA GAGGCCGGTG 
GTGCGGGGGC GCGAGGCGCG GGGGACGGCG GCGGAGTTCC TGTTGGAGGC GGCGGGGCTC 
GAGCTGGTGC GGCGGCGCCG GCTCGGGCAC GGGATGGAGG AGGAGGTCGA GGTGCGCAAC 
CCCTCCGGGA GGGCGGTCGA GGCACGCCTC TCGTTCGGGG TGGGCGCGGA CTTCGAGGAC 
GTCTTCGTGG TGCGCGGCTT CGCGGGGAGG GCGGAGCGCG GGGAGGTCGT GGAGGAGGTC 
CGGGAGGGGG GACTGCGCTA CCTCTACCGG CGGGGCGGGT TCTCGCGGGG GACGGAGGTG 
CGCGCCTTCG CGGAGGGGGC GGAGCCGGTC GCGGGGAGCG GGGGGATCCA CTGCCTCCTG 
CGGCTCGGGG CGGGGCAGAG GCGGGTGGTG CGCGTCTCGG TGGCGCTCGA GGAGGGCGGG 
GAGAGGGTGC GCGCTGCGGG GCGGCGCGGG GCGCCGTATG CCGCGGCGCC GGCGCTCGAG 
ACGGATTGGG AGGCGCTGCG GAGGAGCTGG GAGCGGAGCG TCGAGGACCT CGCGGCGCTC 
ACCTTCGACG CGGGGGAGGG ATTGCTCGTC CCGGCGGCCG GGGCGCCGTG GTACATGGCC 
CTCTTCGGGC GGGACGCGCT CCTCGCGGCG TACGGGGCCA TGATCCTCAC CCCCGAGCCG 
GCGCGTAACG CGCTGCGGGC GCTCGCCCGG TGGCAGGCGA CCGAGCGGGA CGACTACACC 
GACGCCGAGC CCGGCAAGAT CCCGCACGAG CTCCGGCGCG GGGAGCTGGC GTACTTCCGG 
GAGGTCCCGC AGCCCTACTA CGGCACCGCC GACGCCACCC CGCTCTTCCT CGTCCTGCTC 
GAGGAGCACC GGCGCTGGAC CGCCGACGAG GGGCTCGCGC GCGAGCTGGA GGGCGCGGCC 
CGCCGGGCGC TGGACTGGCT CCTCGCCCAC GCCGACAGGA CCTCCGGGGG ATTCGTCGCC 
TACGAGAGCC GCTCCCCCGC GGGCCTCAGG AACCACGGCT GGAAGGACTC GGACGGCTCC 
ATGCTCTTCC GCGACGGGAG GCGCGCAGGG GGCGGGGTGG CCCCCTGCGA GGTCCAGGGC 
TACGCCTACG ACGCCCTCCT CCGCACCGCG CGCCTCGCCG AGAGCGCCTG GGGCGACGCG 
GCGCTCGCCG GAAGGCTCCG GGACGAGGCC GGGGACCTGA GAGAGCGCTT CGACCGCGAC 
TACTGGATGG AGGACCGCGG CTGCTACGCC CTCGCCCTCG ACGGGGAGGG ACGAAAGGTC 
GACTCCGTGA CCTCCAACGC CGGGCACCTG CTCTGGAGCG GCATCGTGCC GGAGGAGAAG 
GCCCCTCTCC TCGCGCGGCG GCTGCTCTCG GAGGAGATGT TCTCCGGCTG GGGCATAAGG 
ACGATGGCCG AAGGAGAGGG CGGCTACGAC CCCCTCTCCT ACCACAACGG CTCCGTCTGG 
CCCCACGACA GCGCCCTCAT CGCCCTGGGT CTCGCCCGCT ACGGTTTCCG GAAGGAGGCG 
GCACGCGTCG CGGCCGCGCT CGTCGAGGCT GCGGAGCGCT TCGGGTACCG CCTGCCCGAG 
GTCTTCGGGG GGGAGCGGCG GAGGGAGGGG GAGGGCCCGG CCGGGTACCC GTCCTCCTGC 
AGCCCGCAGG CGTGGGCCGC GGCCGCGGTG CCGCTCCTCG TGCGCGCCCT CCTCGGGGCC 
GAGCCCGACC CGGAGGCGCG GGTACTGCGC TCGGGCCCGG TGTTGCCCGA GGGCGTCCGC 
GGGCTGCGCC TCGAGGGCGT CCCGGCCTTC GGCGGGCGGC ACGCGGTCGG GGGGTGA 

 

Protein sequence

MQLPDRETET LEWAVSVVSP GAYAVSDGAG DFDAGAGGLY YRDTRHLSRF VLEVGGERPV 
VRGREARGTA AEFLLEAAGL ELVRRRRLGH GMEEEVEVRN PSGRAVEARL SFGVGADFED 
VFVVRGFAGR AERGEVVEEV REGGLRYLYR RGGFSRGTEV RAFAEGAEPV AGSGGIHCLL 
RLGAGQRRVV RVSVALEEGG ERVRAAGRRG APYAAAPALE TDWEALRRSW ERSVEDLAAL 
TFDAGEGLLV PAAGAPWYMA LFGRDALLAA YGAMILTPEP ARNALRALAR WQATERDDYT 
DAEPGKIPHE LRRGELAYFR EVPQPYYGTA DATPLFLVLL EEHRRWTADE GLARELEGAA 
RRALDWLLAH ADRTSGGFVA YESRSPAGLR NHGWKDSDGS MLFRDGRRAG GGVAPCEVQG 
YAYDALLRTA RLAESAWGDA ALAGRLRDEA GDLRERFDRD YWMEDRGCYA LALDGEGRKV 
DSVTSNAGHL LWSGIVPEEK APLLARRLLS EEMFSGWGIR TMAEGEGGYD PLSYHNGSVW 
PHDSALIALG LARYGFRKEA ARVAAALVEA AERFGYRLPE VFGGERRREG EGPAGYPSSC 
SPQAWAAAAV PLLVRALLGA EPDPEARVLR SGPVLPEGVR GLRLEGVPAF GGRHAVGG