| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0400 |
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| Symbol | |
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| ID | 4115221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 429223 |
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| End bp | 430278 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638035189 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_643187 |
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| Protein GI | 108803250 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000319511 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGAGAGG ACGCTTTCGA GCGCGCCGGG GGTACCGGGA CGGCCCGGCG CAAGAAGGAG
CACATCCGGA TCTGCCTGGA GGAGGACGTG GACCACCCGG TGCTCACCAC GGGCTTCGAG
CGCTACCGGG TTCCCTACGC GAGCCTGCCG GAGCTGGACC TCGCCGCCGT GGACCTCTCG
TGCGGGATGC TCGGGCGGCG GCTCTCGATG CCGTTCATGA TCCTTAGCAT GACCGGAGGG
GCGAGGCTCT CGCGCACCAT CAACCGGAAC CTCGCGCGGG CCGCCCAGGA GTGCCGGGTT
GCGCTGGGGC TCGGCTCGAT GCGGATAGCG CTGGAGGACC CCGCGGCCGC GGAGAGCTTC
CGGGTGCGCG AGCTCTGCCC GGACGTGCCC CTGTGGGCCA ACCTGGGAGC GGCGCAGCTG
AACCGGGGCT TCGGCGTGGA GGAGTGCCGC AGGGTCGTCG AGATCTCCGG GGCCGACGGC
CTGTGTCTGC ACCTGAACGC CCTGCAGGAG GCGGCCCAGC CGGGGGGCGA CACGGACTGG
TCGGGGATAG CCGAGAAGCT CGCCGCCGTT GCCGGCGAGC TCGGGGTGCC GGTGATCGTC
AAGGAGGTGG GCTTCGGCAT CGGCCCCCGG ACCGCCCGGA TGCTGGGGGG ACTGCCGGTC
TGGGGCGTGG ACGTGGGGGG AGCGGGGGGA ACCTCCTGGC TGGAGGTGGA GAAGCGGGCC
TGGGGCAGAG ACGACCTCGA CGCCTTCGAC GCGTTCGGAA CCCCCACCGC CGAGAGCATC
TCCGTCGTCC GTAAGCACTG CCCGGACAAG CTCGTCATAG GCTCCGGCGG CGTACGCACC
GGCGTGGACG CGGTCAAGGC CCTCGCCCTG GGAGCGGACA TGGTCGGCGC GGCCCGCCCG
CTCCTGCGCC CCGCCACCGA GTCTGAGGAA GCCGTGATCC GGTGGCTCCG GCGCTTCCGG
GAGGAGATGC GCCTCGCCGC CTTCTGCGCC GGAGCCCCGG ATCTCAACGC CCTGCGCGAG
CTGGAACTCG AGCCAGCGCC AGACAACCTG CCTTGA
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| Protein sequence | MGEDAFERAG GTGTARRKKE HIRICLEEDV DHPVLTTGFE RYRVPYASLP ELDLAAVDLS
CGMLGRRLSM PFMILSMTGG ARLSRTINRN LARAAQECRV ALGLGSMRIA LEDPAAAESF
RVRELCPDVP LWANLGAAQL NRGFGVEECR RVVEISGADG LCLHLNALQE AAQPGGDTDW
SGIAEKLAAV AGELGVPVIV KEVGFGIGPR TARMLGGLPV WGVDVGGAGG TSWLEVEKRA
WGRDDLDAFD AFGTPTAESI SVVRKHCPDK LVIGSGGVRT GVDAVKALAL GADMVGAARP
LLRPATESEE AVIRWLRRFR EEMRLAAFCA GAPDLNALRE LELEPAPDNL P
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