| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0393 |
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| Symbol | |
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| ID | 4117491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 420851 |
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| End bp | 421852 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035182 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_643180 |
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| Protein GI | 108803243 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0897336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCAGAA GACCCGTAAC CCTGTTCACC GGCCAGTGGG CGGACCTGCC GCTCGAGGAG
CTGGCCCCCC TCGCCAGGGA GATGGGCTAC GACGGCCTGG AGCTCGCCTG CTGGGGGGAC
CACTTCGACG TGCGCAGGGC GCTCGAGGAC GAGGGCTACG CCGCCGGGAG GCGAGAGCTC
CTCTCCTCCC ACGACCTGCG CTGCTGGGCC ATAGGCAACC ACCTGGTGGG CCAGGCCGTC
TGCGACCCCA TCGACGAGCG CCACAGGGCC ACCCTCCCCG AGCGCGTGTG GGGGGACGGC
GACCCCGAGG GGGTGCGGCG GCGAGCCGCC GAGGAGATGA AGGACACCGC CCGCGCCGCG
AGGAGGCTCG GCGTGGAGGT GGTCACGGGC TTCACCGGCT CCTCCGTCTG GCACAAGCTC
TACTTCTTCC CGCCCACCCC GCACGAGGAG GTCGAGGCCG GCTACGAGGA CTTCGCCCGC
CGGTGGAACC CCATCCTGGA CGTCTTCGAC GAGGAGGGGG TGCGCTTCGC CTTCGAGGTG
CACCCCACGG AGATCGCCTA CGACCTCTAC TCCGCGGAGC GGGCGCTCGA GGCCGTGGGG
GGCCGGAGGG CCTTCGGCTT CAACTTCGAC CCCTCGCACC TCTACTGGCA GTTCGTCGAT
CCCGTGAAGT TCATAGACCG CTTCGCCGAC AGGATCTACC ACGTCCACAT GAAGGACGCC
GCCCGCACCC TCGACGGCCA GAGCGGCATC CTCTCCTCCC ACCTCCCCTT CGGGGATCAC
CGGCGCGGCT GGGACTTCCG CTCGCTGGGC CGCGGCGGGG TGGACTTCGA GGAGATCGTC
AGGGCCCTCA ACCGCACGGG CTACGGCGGC CCGCTCTCGG TGGAGTGGGA GGACTCCGGG
ATGGACCGGG TGCACGGCGC CCGCGAGTCC GCCGCCTTCG TCCGGAGGCT GGACTTCGAG
CCCTCCGGCG TGGCCTTCGA CGCCGCCTTC GGGGAGGAGT GA
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| Protein sequence | MPRRPVTLFT GQWADLPLEE LAPLAREMGY DGLELACWGD HFDVRRALED EGYAAGRREL
LSSHDLRCWA IGNHLVGQAV CDPIDERHRA TLPERVWGDG DPEGVRRRAA EEMKDTARAA
RRLGVEVVTG FTGSSVWHKL YFFPPTPHEE VEAGYEDFAR RWNPILDVFD EEGVRFAFEV
HPTEIAYDLY SAERALEAVG GRRAFGFNFD PSHLYWQFVD PVKFIDRFAD RIYHVHMKDA
ARTLDGQSGI LSSHLPFGDH RRGWDFRSLG RGGVDFEEIV RALNRTGYGG PLSVEWEDSG
MDRVHGARES AAFVRRLDFE PSGVAFDAAF GEE
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