Gene Rxyl_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0381 
Symbol 
ID4117480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp409263 
End bp410363 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID638035171 
ProductGTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_643169 
Protein GI108803232 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTTA GCCCGGTAGA GGAGATCATC GAGGAGATAA GAGCGGGCAG GATGGTCATC 
GTCTGCGACG ACGAGGACCG CGAGAACGAG GGCGACCTCA CCGTAGCGGC CGAGCTTGTC 
ACCCCAGAGC ACATCAACTT CATGGCCAAG TACGGCCGCG GCCTCATCTG CCTGCCCATG 
GCGCAGGAGC TCATAGAGCG GCTTGAGATC CCCGAGATGG TGCGCCACAA CTCCTCCAGG 
ATGGGCACCG CCTTCACGGT CTCCATAGAG GCCAGGGAGG GGATCTCCAC GGGCATCTCG 
GCGGCCGACA GGGCGCACAC CTGCAGGGTT GCGGTCTCTG ACGAGGCGGG GCCTGAGGAC 
ATAGTGATGC CGGGGCACGT CTTTCCCCTC AAGGCCAGGA AGGGAGGGGT CCTGCAGCGT 
CCTGGGCAGA CGGAGGCTGC GGTGGACCTG GCGCGCCTTG CGGGGTTGAA GCCTGCTGGG 
GTGATCTGCG AGGTGATGAA GGACGACGGG ACGATGGCCA GGGTGCCTGA CCTCGAGCGT 
TTCTCTGCGG AGCACGGCAT AAAGATGGTC ACCGTAGCCC AGATCATCGA GTACCGCCTC 
GCCAGCGACC CGCACGTCCG GTGCCTCGGC GAGGAGGCGC TCCCCACCCG CTTCGGAGAG 
TTCCGGCTGC GGAGCTACGC CGGCGTGAGC ACCGGCCTAA TCCACCGCGC CCTGCTCGCC 
GGAGAACCGG GGGAGAACGG CCCCCCGCTC GTCGGCGTGC GCGCGGCCTG CCCGACGGGG 
GACGCGCTGC ACTCCCTGCG CTGCGACTGT GGGGAGCGGC TGAGGGATGC CATGGAGCGC 
GTCGCCGCCG AGGGCGAGGG GGTGATCCTC TACCTCCATC CCGGCCCCGG CGCGCCCCTG 
CACCCCCTCC CCGGCGGCGA GGACGAAGAC CTCGCCCCCT ACCGGGCGGG CGTCGAGATC 
CTCAGAGACC TGGGGCTCGG CCGCGTCCGG CTGCTGATGG CGGGCGGCGA GGAGCCGCTG 
GACCTCGAGA GCGGGCCCGG GCCCGCCCTC GCCGGCCGGC TGCTGCGGGC GAAAGCGGGG 
GTGGCCGCCC CCTCCCTCTA G
 
Protein sequence
MPFSPVEEII EEIRAGRMVI VCDDEDRENE GDLTVAAELV TPEHINFMAK YGRGLICLPM 
AQELIERLEI PEMVRHNSSR MGTAFTVSIE AREGISTGIS AADRAHTCRV AVSDEAGPED 
IVMPGHVFPL KARKGGVLQR PGQTEAAVDL ARLAGLKPAG VICEVMKDDG TMARVPDLER 
FSAEHGIKMV TVAQIIEYRL ASDPHVRCLG EEALPTRFGE FRLRSYAGVS TGLIHRALLA 
GEPGENGPPL VGVRAACPTG DALHSLRCDC GERLRDAMER VAAEGEGVIL YLHPGPGAPL 
HPLPGGEDED LAPYRAGVEI LRDLGLGRVR LLMAGGEEPL DLESGPGPAL AGRLLRAKAG 
VAAPSL