| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0371 |
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| Symbol | |
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| ID | 4115094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 397682 |
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| End bp | 399316 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638035161 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_643159 |
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| Protein GI | 108803222 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00566676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGACGA GGAGGCCCTG GCTTGGGGTT TATGAGGGCA GGATCTCCTA CGGGACCATA
GAGACCTCGC TGACCCGGTT TCTGGAGGGG GCTGCGGCGA GGTACCGCGA CAGGCCCGTG
ATGACATCCG CCGGCGGGCG GCGGGTGACC TACGGGGAGC TGCTCGAGCA GAGCGAGCGG
TTCGCCGCGG CGCTCGCCGG GCTGGGGGTG GGGAAGGGGG ACAGGCTCGC CCTGATGCTC
CCCAACAGCA TAGAGTACGT CATCTCCTTC TTCGCCGCAG CGCGGCTCGG GGCGGTCGTC
GTGCAGCTCA ACCCCCTCTA CGCCGGGCGC GAGCTGAGGC ACATCCTGCA GGACTCGGGG
GCGAGGGCCG CGGTCGTGCA CGAGGGGGCC TACGGGCGCC TCCGCGAGGT CAGGGAGGGC
CTCCCGCTCG AGCGCGCCGT CGTGGTGGGG GAGGAGCCCG CGAAGCCGGA CGTCTCGTTC
GGCGAACTTC TCAGCTCCGG CTCCGGCCCG CTCCCCGAGG CGCCCCTCGA TCCCGCGAGC
GACCTCGCCG TGCTGCAGTA CACCGGCGGG ACCACCGGCG TCTCCAAGGG CGCGATGCTC
ACCCACCGCA GCCTGCTCGT CAACATCGAG GCCAACATAA GCCTCGCCAT GGAGAACCCC
CGCGATCTCG ACGGCGGCAA GACCGTCGCC GTCGCACCCT TCTTCCACAT CTTCGGGAAC
GTGGTCATCC TGCTGACCTC AATCCACTAC GGGATGAACC TTCTCCTCGT GCCGCGCTTC
CAGGTGGACG AGATGATGCA GCTCATAAAG CGCGAGAGGC CGGCCATGCT CGGCGGGGTC
GCCACCATCT TCACCGCCCT GCACAACTAC CCGCGGATGG AGGACTACGG CCTGGGAGAG
GTGCTGCTCT ACATCTCCGG CGGGGCCAGC GTGCCCGCCG AGCTGCTCCG CTCCTTCCAG
CGCAGGACCG GGCGTCCCAT CTGGGAGGGC TACGGGCTCT CGGAGGCCGG CACGGTGACC
ATAAACACCT ACCTCAGGGG GCCGGTGCCC GGCAGCGTCG GCGTGCCCAT GCCGACCCTC
GACGTGAGGG TGGTGGACCC CGAGACGGGG GAGAGGGAGA TGCCCGTCGG GGAGCCCGGC
GAGCTCGTCG TCAAGGGGCC GCAGGTCATG AAGGGCTACT GGAACATGCC CGAGGAGACG
GAGAAGGCCC TCAGGGAGGG CTGGTTCTAC ACCGGCGACA TCGCCCGGAT GGACGAGGAG
GGCTACCTCT ACATCGTCGA CCGCAAGAAG GACATGATCA ACGTCAGCGG CTACAAGGTC
TACCCGAGGG AGGTGGAGGA GGTCATCTAC TCCCACCCGG AGGTGGTGGA GGCCGTCGTT
GTGGGAAGCC CCGACCCCTA CCGGGGGGAG GTGCCAAAGG CCTTCGTGGT CAGAAGAAGA
AGAAGAGGGG AGGGCACCTC CGTGAGCGAG GAGGAGCTCA TCGAGCACTG CAGGAGGGAG
CTTGCCCCCT ACAAGGTACC CAGGGAGGTG GAGTTCAGGG AGGAGCTGCC CAAGAGCGCT
GTGGGCAAGC TGCTCAGGCG GGTGCTTGCG CAGGAGGAGC GCTCCCGCGG GCAGGAGCAG
GGGAGCGCGG GATGA
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| Protein sequence | METRRPWLGV YEGRISYGTI ETSLTRFLEG AAARYRDRPV MTSAGGRRVT YGELLEQSER
FAAALAGLGV GKGDRLALML PNSIEYVISF FAAARLGAVV VQLNPLYAGR ELRHILQDSG
ARAAVVHEGA YGRLREVREG LPLERAVVVG EEPAKPDVSF GELLSSGSGP LPEAPLDPAS
DLAVLQYTGG TTGVSKGAML THRSLLVNIE ANISLAMENP RDLDGGKTVA VAPFFHIFGN
VVILLTSIHY GMNLLLVPRF QVDEMMQLIK RERPAMLGGV ATIFTALHNY PRMEDYGLGE
VLLYISGGAS VPAELLRSFQ RRTGRPIWEG YGLSEAGTVT INTYLRGPVP GSVGVPMPTL
DVRVVDPETG EREMPVGEPG ELVVKGPQVM KGYWNMPEET EKALREGWFY TGDIARMDEE
GYLYIVDRKK DMINVSGYKV YPREVEEVIY SHPEVVEAVV VGSPDPYRGE VPKAFVVRRR
RRGEGTSVSE EELIEHCRRE LAPYKVPREV EFREELPKSA VGKLLRRVLA QEERSRGQEQ
GSAG
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