Gene Rxyl_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0366 
Symbol 
ID4115089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp392796 
End bp393656 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content75% 
IMG OID638035156 
ProductCitryl-CoA lyase 
Protein accessionYP_643154 
Protein GI108803217 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.305277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCCGA CCGCGGCACC CCCGCGCAGC TACCTCTACG TCCCCGGGAG CGACCCGCGC 
AGGATCGAGA AGGCGCTCTC CAGCGAGGCG GACGCCGTGG TCCTCGACCT CGAGGACGCC
GTCGCCCCCG ACCACAAGGA GGAGGCCCGG GAGAACGTCG CCGGGGTGCT CGCGCGCGCG
AACCGCAAGC CCGTCTTCGT CCGGGTGAAC GCCCCGGGCA GCGCGCTCTG CGGGCGCGAC
GTCGAGGCGG TGGCCCGTCC CGGGCTCGCC GGGGTACGGC TGCCGAAGAC GGAGTCCGCG
GAGGAGGTGC GCCGGGTCGC GGAGAGGCTG GAAGAGCTTG GCTGCGAGGC GGGCGTCCAG
TGCCTCATCG AGTCCGCCCT CGGGCTCGAG ATGGCCTTCG AGCTTGCGCG CTCCCACCCG
CGCGTCACGG GCCTCTCCCT CGGCGAGGCC GACCTCGCCG CCGACCTCGG GGCGAGCGGC
GAGGAGGGGC TGCTCTACGC CCGCTCGCGG GTCGTCGCGG CCTCCAGGGC GGCCGGCCTG
CAGCGCCCGG TGCAGAGCGT GTACACCAAC GTGCGCGACC TCGACGGGCT GCGGCGCTCG
ACCGAGGCGG GCAAGCGGCT CGGGTTCTTC GGGCGCTCGG CGATCCACCC GGCCCAGCTT
CCCGTCATCA ACGAGGTCTT CACCCCCACA GAAGAGGAGG TGGCCGAGGC CAGAGAGCTG
CTGAGCAGGA TGGAGGGCGC GGCCGCGTCG GGCAGCGGCG CCTTCGTGCT GGAGGACGGG
AGGTTCGTGG ACGAGGCCGT CGTCCGGGCG GCGCGCTTCA CGCTCGCCGT CGCCCGCGGC
GCGAACGGGG AGGAGCGATG A
 
Protein sequence
MTPTAAPPRS YLYVPGSDPR RIEKALSSEA DAVVLDLEDA VAPDHKEEAR ENVAGVLARA 
NRKPVFVRVN APGSALCGRD VEAVARPGLA GVRLPKTESA EEVRRVAERL EELGCEAGVQ
CLIESALGLE MAFELARSHP RVTGLSLGEA DLAADLGASG EEGLLYARSR VVAASRAAGL
QRPVQSVYTN VRDLDGLRRS TEAGKRLGFF GRSAIHPAQL PVINEVFTPT EEEVAEAREL
LSRMEGAAAS GSGAFVLEDG RFVDEAVVRA ARFTLAVARG ANGEER