Gene Rxyl_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0362 
Symbol 
ID4115085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp388321 
End bp389211 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID638035152 
Productinner-membrane translocator 
Protein accessionYP_643150 
Protein GI108803213 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGTCC AGGCGCTGGT CACCGGGCTG CTGCTCGGCG GGGTCTACAG CCTCGTCTCG 
ATGGGCCTCA CGCTCATCTT CGGGGTGCTC GACATCCTGA ACTTCGCGCA CGGGGCCTTC
ATGGCGCTCG CGATGTACGC CTCCTTCGTG CTGGTGGCGA ACGCGGGGTT CGACCCCTAC
CTCTCGCTCT TGGTCTCCGT GCCGCTGCTC TTCGTTCTCG GGGTACTCGT GCAGCGGGTC
CTGCTGGCCC GGGTCATGGA CCAGCCGCAC GAGAACCAGC TCCTGCTCAC CTTCGGGCTC
GCGCTGCTCA TAGAGAACGC GCTCCTCATG GTCTTCACGG CCACGCCGCG CACCGTGGAA
TTCCCCTACG CCCAGACCGG CATACCCCTG GGGTTCGCGA CGGTTCGGGG CCCGCTCGAC
GTCTTCGGCG CGGTCGCCGA CCTGCCACGG GTCATAGCCT TCCTCGGATC GCTCGTGATC
GCCGGGGGGC TCTTCTACCT CCTGCGGCGC ACCAGCCTGG GCACGGCGAT CCGGGCCGTC
GCCGAGAACC CGGACGGGGC GGCGATGGTC GGGATAGACG TGCGGAGGAT GCACATGATC
GCCTTCGGGC TCGGCACCGC GTGCGTGGCG GCGGCGGGCA CCCTGGTCCT GCCGTTCCTC
TCGCTGCAGC CCACCACCGG CGAGCAGTTC AACGTCATAG CCTTCGTCGT TGTGGTGCTC
GGGGGTTTGG GCAACGTGGT CGGGGCGCTC GTCGGCGGGA TTTTGATAGG GCTCGTCCAG
GAGCTCGGCG GCGCCTTCGT GCCCGGGGTG GACAAGCTGT TCTTCGTGTT CGTGGTCTTC
GTCCTGACGC TCCTGCTCCG CCCGCAGGGC CTCTTCGGGG GGAAGCCGTG A
 
Protein sequence
MLVQALVTGL LLGGVYSLVS MGLTLIFGVL DILNFAHGAF MALAMYASFV LVANAGFDPY 
LSLLVSVPLL FVLGVLVQRV LLARVMDQPH ENQLLLTFGL ALLIENALLM VFTATPRTVE
FPYAQTGIPL GFATVRGPLD VFGAVADLPR VIAFLGSLVI AGGLFYLLRR TSLGTAIRAV
AENPDGAAMV GIDVRRMHMI AFGLGTACVA AAGTLVLPFL SLQPTTGEQF NVIAFVVVVL
GGLGNVVGAL VGGILIGLVQ ELGGAFVPGV DKLFFVFVVF VLTLLLRPQG LFGGKP