| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0360 |
|---|
| Symbol | |
|---|
| ID | 4115083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 386592 |
|---|
| End bp | 387323 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638035150 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_643148 |
|---|
| Protein GI | 108803211 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTGC TCGAGGTACA GGACGTGAGC AAGTCCTTCG CCGGGCTCAG GGCGCTGCAC
AGCGTCTCCC TGCAGGTCGA GAGGGGGAGC ATCGTCGGCC TGATCGGACC GAACGGCGCG
GGCAAGACCA CGCTCTTCAA CGTAATCGCC GGCGTGATGA AGCCCGATGC GGGGCGCGTC
CTCTTCGACG GCACCGACGT GACCGGGTGG CCCCCGTACC GGATCGCCCG CCTCGGCATC
GGGCGTACCT TCCAGCTCAT GAAGCCCTTC GACACCCTCT CCGTCCTGGA CAACGTCACC
GTCGCCACCC TGCAGCGCCA CCGCAGCCGC AAGGAGGCCC GCCGGGCGGC GACCGAGGTC
GTCGAGCGCG TCGGGCTGGG CGAGTGGGCG GACAGGAAGG CCTCCGTCCT CTCCACCGCG
GGGTACAAGC GCCTGGAGCT CGCCAAGGCG CTCGGCCTCG AGCCCTCGCT CTTGCTGCTG
GACGAGGTCC TCGCCGGGCT CGTGCCCGCC GAGCGGGCCC GGGTGGTCGA GCTGCTGCGG
GAGATACGGG CCGAAGGCGT GACGATGCTC CTCGTGGAGC ACGTCATGTC CGCCGTCATG
GCGCTCTCGG ACCACGTCTA CGTCCTCCAC CACGGGGAGA TGCTCGCCAG CGGAACGCCG
GAGGAGGTAA CGAAGGACCC CCGGGTCATA GAGGCCTACC TGGGAGAAGA GGGGCACCAT
GCTGGCGCTT GA
|
|---|
| Protein sequence | MTLLEVQDVS KSFAGLRALH SVSLQVERGS IVGLIGPNGA GKTTLFNVIA GVMKPDAGRV
LFDGTDVTGW PPYRIARLGI GRTFQLMKPF DTLSVLDNVT VATLQRHRSR KEARRAATEV
VERVGLGEWA DRKASVLSTA GYKRLELAKA LGLEPSLLLL DEVLAGLVPA ERARVVELLR
EIRAEGVTML LVEHVMSAVM ALSDHVYVLH HGEMLASGTP EEVTKDPRVI EAYLGEEGHH
AGA
|
|---|
| |