Gene Rxyl_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0359 
Symbol 
ID4115082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp385904 
End bp386605 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID638035149 
ProductABC transporter related 
Protein accessionYP_643147 
Protein GI108803210 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCGC TTGAGAACGT CTCGGCCGGC TACGGCAACC TCCAGGTCCT GCACGGCATC 
TCGCTGGAGG TGCAACCCGG GGAGCTCGTG GCGATCATCG GAGCGAACGG GGCGGGCAAG
ACCACGACCC TGCGCACCAT CTCGGGCTTT ATCCGGCCCA GCTCCGGCAG CATCTCCTTC
GAGGGCGAGC CGCTCGCCGG CAAGCGGCCG CACGACATCG CCAGAAGGGG CCTCGTGCAG
GTGCCGGAGG GGCGCAGCCT CTTCGGCGGC CTCACGGTGC TGGAGAACCT CTCGATGGGC
GGCTACACCA GGACCGCCGC GGAGCGCGAG GAGGCGCTGA GGGAGGTCTA CGAGCTCTTC
CCCGTGCTGA AGGAGCGCCG CGACCAGCCC GCCGCCACCC TGAGCGGCGG CCAGCAGCAG
ATGGTTGCAA TAGGGCGCGC GCTCATGGCG AGGCCGCGCC TGCTGATGCT GGACGAGCCC
TCGCTCGGGC TCGACCCCAA GACCACTGGG AGGGTCTTCT CGGTCGTGGA GAGGATCCGG
CAGACCGGCG TCGCGGTCCT CATCGTGGAG CAGGACGCGG TGAAGACGCT GCGGCTCGCG
GACCGGGCCT ACGTGCTGGA GAGCGGGGAG GTGGCGCTCC AGGGGACGGG GAGCGAGCTG
CTCGAGGACC AGAAGGTAAG AAGCGCCTAC CTGGGGCTGT GA
 
Protein sequence
MLALENVSAG YGNLQVLHGI SLEVQPGELV AIIGANGAGK TTTLRTISGF IRPSSGSISF 
EGEPLAGKRP HDIARRGLVQ VPEGRSLFGG LTVLENLSMG GYTRTAAERE EALREVYELF
PVLKERRDQP AATLSGGQQQ MVAIGRALMA RPRLLMLDEP SLGLDPKTTG RVFSVVERIR
QTGVAVLIVE QDAVKTLRLA DRAYVLESGE VALQGTGSEL LEDQKVRSAY LGL