| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0349 |
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| Symbol | |
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| ID | 4115072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 374792 |
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| End bp | 375784 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638035139 |
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| Product | transketolase, central region |
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| Protein accession | YP_643137 |
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| Protein GI | 108803200 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0164413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGGGA CCATCAGCTA CACCGAGGCT CTCAGGGAGG CGCTCGACGA GGAGCTGGGG
CGCGACGAGA GGACCTTCTT CATGGGAGAG GACGTGGGGG CCTTCGGCGG CATCTTCGGG
GAGGCCGCGG GGCTCCAGCA GAAGTACGGC AAGGAGCGCG TCTTCGACAC CCCCATCTCC
GAGACGTTCA TAGTCGGCGG CGGGGTCGGT GCGGCCATCA CCGGGCTCCG GCCCATCGTG
GAGCTGCAGT TCGCCGACTT CGTGAGCGTG GCGATGGACG AGATCTACAA CAAGGCCGCC
AAGTGGCGTT ACATGCACGG CGGCCTGTTC AAGGTGCCGC TGGTGATCAT CGCCCCCGAA
GGGGCGATGG GGGGTGCGGG CCCCGAGCAC TCGCAGTGCC CGGAGGCGCT CTTCTGGTCA
GCCGCGGGCC TGTATGTCCT CACCCCGGCC ACCCCGGCGG ACGCGAAGGG CCTGCTGAAG
AGCGCGATCC GCGACGACAA CCCGGTGCTC TTCCTGCCGC ACAAGGCGCT CGGGAACACC
ACGGGCGAGG TACCGGAAGG GGAGCATCTC GTCCCGCTCG GCGAGGCCGT CGTGAGGCGT
CAGGGCGGCG ACGTGACCCT GGTGGCCTGG TCGGCCATGG TCCTCAAGGC GCTGGAGGCT
GCGGATCGGC TGGCGGAGGA GGGCATTGAG GTCGAGGTCA TCGACCCGCG GGGGATCCGG
CCCTTCGACT TCGAGACGGT GCTGCGGTCG GTCGAGAAGA CCGGCCGGGT GGTGCTCGCC
CATGAGGCTC CGCTGCCCGG GGGGCCCGGC AGCGAGGTCG CCGCGGTCAT CGCCGAGCGG
GCCATAGCCT CCCTGGAGGC ACCGGTGAGG CGGGTCGGTG CCCCCGACGT GCCCGTGCCC
CAGAGCGCGC ATCTGGAGCG CTTCGTGGTG CCGCAGACGG AGGACATAGT GAACGCGGTG
AGGGAGGTGG CCGGGTCGGC GGTCACCGTT TAG
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| Protein sequence | MPGTISYTEA LREALDEELG RDERTFFMGE DVGAFGGIFG EAAGLQQKYG KERVFDTPIS
ETFIVGGGVG AAITGLRPIV ELQFADFVSV AMDEIYNKAA KWRYMHGGLF KVPLVIIAPE
GAMGGAGPEH SQCPEALFWS AAGLYVLTPA TPADAKGLLK SAIRDDNPVL FLPHKALGNT
TGEVPEGEHL VPLGEAVVRR QGGDVTLVAW SAMVLKALEA ADRLAEEGIE VEVIDPRGIR
PFDFETVLRS VEKTGRVVLA HEAPLPGGPG SEVAAVIAER AIASLEAPVR RVGAPDVPVP
QSAHLERFVV PQTEDIVNAV REVAGSAVTV
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