| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0345 |
|---|
| Symbol | |
|---|
| ID | 4115068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 370702 |
|---|
| End bp | 371661 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638035134 |
|---|
| Product | HtpX-2 peptidase |
|---|
| Protein accession | YP_643133 |
|---|
| Protein GI | 108803196 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.937854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGCCT CCGGCGAGAT GGTCGGCACC TTCCGCGACC GCATCGCGGT CAACAGGCGC
AACAGCCTGC TGCTCGTCGC CGTCTTTCTG GCCTTCGTGA CGGCGCTTGG CTATGTCGTC
GGGTACGCGT GGGTCGGGGA CCCGGCGGGG GCCGTCTTCG GGCTCCTCCT CGCCCTCGCC
GCCGGGACCG TCTCCGGGTT CGCCACCTAC TACGCCGGCG ACAGGATGGT GCTCGCCGCC
TCCCGGGCGC GGGAGATCAC GCACGACGAC GCCCCCGTGC TCTTCAACGT CGTCGAGGAG
ATGGCCATAG CCGGTGGGCT GCCGATGCCG GAGGTCTACA TCATCGAGGA CTCCGCGCCG
AACGCCTTCG CCACGGGACG CGACCCGGAG CACGCCAAGA TCGCCGTCAC CCGCGGGCTG
CTCGAGAAGC TCGACCGCGA CGAGCTGCAG GGCGTGATCG CTCACGAGAT GGCCCACGTC
GGCAACTACG ACATCCGCTA CGCGATGCTC GTCGGCGTAC TCGTCGGCAC CACGGTCCTC
ATCTCCGACT TCTTCCTGCG CGGCCTGTGG TTCGGCAGGG GGCAGCGTCG CGGCGAGGGC
GGCGGGCAGA TACAGCTCGT CATGTTCCTC ATCGCCCTGG TGCTCGCCAT CCTCGCCCCC
CTCTTCGCGC GGCTCCTCCA GCTCTCCATA AGCCGCCAGC GCGAGTACCT CGCGGACGCC
ACCGCCGTGC AGCTCACCCG CAACCCCAAG GGCCTGGCCG ACGCCCTGCA GAAGATAAGC
TCCGACAGGG AGGTGCTGGA GGTGGCCAAC CGCGCCACCG CCCACCTCTA CATTGTCAAC
CCCATCAAGA AGTTCGAGAG ACGGGCCAGG GGCCTCTTCT CCACCCACCC GCCCATAGAG
GAGCGCATAA GGATCCTGCG CTCCATGGAG ACCGGCGGCA TACCGCAGCA GGCCCGCTGA
|
|---|
| Protein sequence | MPASGEMVGT FRDRIAVNRR NSLLLVAVFL AFVTALGYVV GYAWVGDPAG AVFGLLLALA
AGTVSGFATY YAGDRMVLAA SRAREITHDD APVLFNVVEE MAIAGGLPMP EVYIIEDSAP
NAFATGRDPE HAKIAVTRGL LEKLDRDELQ GVIAHEMAHV GNYDIRYAML VGVLVGTTVL
ISDFFLRGLW FGRGQRRGEG GGQIQLVMFL IALVLAILAP LFARLLQLSI SRQREYLADA
TAVQLTRNPK GLADALQKIS SDREVLEVAN RATAHLYIVN PIKKFERRAR GLFSTHPPIE
ERIRILRSME TGGIPQQAR
|
|---|
| |