Gene Rxyl_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0344 
Symbol 
ID4115067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp370137 
End bp370697 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID638035133 
Producthypothetical protein 
Protein accessionYP_643132 
Protein GI108803195 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.571878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACCG TCTTGACGAT AATCGTGGTG GTGGCCGTGG TCGCGGTCGC GGTCTACGCC 
GTCGCCACCT ACAACGGGCT GGTGCGCAGG CGCAACGAGG TCGAGGAGGC CTACCGTCAG 
ATAGACGTGC AGCTCAAGCG GCGCTACGAC CTGATCCCCA ACCTCCTCGA GGGCGTGAAG 
CGGTACTTCC GCCAGGAGCA GGACGTGCTC ACCGAGATAA CGCGGGCGCG CTCGGCGGCG 
ATGCAGCCGC ACTCGCCGAG GGAGCAGGCC CAGGCCGAGG CGCGCCTCTC CGGGGCCATA 
GGCAACCTCT TCGCCGTCGC CGAGAACTAC CCCGAGCTGC GCTCCGAGAG GGTGCTGCTG 
GACTTCCAGG AGGAGCTCGC CTCGACGGAG AACAAGATCT CCTTCGCCCG CCAGCACTAC 
AACGACTCCG TGCAGGCCTA CAACACCAAG ATACAGAGCT TCCCGGCCGT GATCTTCGCC 
CGCGCGATGG GCTTCACCGA GAAGGAGTAC TTCGAGGCCG CGGGCCCCGA GCGGGAGTCC 
GTGACGGTCT CCTACGACTG A
 
Protein sequence
MGTVLTIIVV VAVVAVAVYA VATYNGLVRR RNEVEEAYRQ IDVQLKRRYD LIPNLLEGVK 
RYFRQEQDVL TEITRARSAA MQPHSPREQA QAEARLSGAI GNLFAVAENY PELRSERVLL 
DFQEELASTE NKISFARQHY NDSVQAYNTK IQSFPAVIFA RAMGFTEKEY FEAAGPERES 
VTVSYD