| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0342 |
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| Symbol | |
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| ID | 4115065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 366877 |
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| End bp | 368304 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638035131 |
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| Product | glutamate synthase (NADH) small subunit |
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| Protein accession | YP_643130 |
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| Protein GI | 108803193 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGACC CGAAGGGCTT TCTCAAGATA GGCCGCAAGC CGGTCCCCAA GCGCCCGGTG
GAGGAGCGCG TCCGGGACTA CCGTTGGGTC TACGAGCCCA TGCCCGAGGG CGAGCTGCGG
AGGCAGGCCT CCCGCTGCAT GGACTGCGGG GTGCCCTTCT GCAACACCGG CTGTCCCCTG
GCGAATCTCA TCCCCGACTG GAACGACCTC GTCTACCGCG ACCACTGGCG CGAGGCCATA
GACCGGCTGC ACGCCACGAA CAACTTCCCC GAGTTCACCG GCATCCTCTG CCCGGCGCCG
TGCGAGGCGG CGTGCGTGCT CTCCATAAAC GACAGGCCGG TCACCATAAA GGAGATAGAG
CGCTCGATCA TCGAGCGGGC CTTCGAGGAG GGGTGGGTCG TCCCCAAGCC CCCGCCGCCG
GAGAGGCGGA CCGGGAAGAG GGTCGCGGTG GTCGGGAGCG GCCCGGCGGG GCTCGCCGCG
GCGCAGCAGC TCAACCGGGC CGGCCACTCG GTCGTGGTCT TCGAGAAGGA CGACCGCCCC
GGCGGTCTGC TGCGCTACGG CATCCCGGAC TTCAAGATGG AGAAGTGGGT CATAGACCGC
AGGCTGCGCC AGCTGGAGGA GGAGGGGATA GAGTTCCGCA CCGGCGCCTA CGTGGGGTAC
GACCCGACGG CGGAGGAGCT GCGGCGCGGC TTCGACGCGG TGGTGCTGGC GGTGGGGGCG
CTGCAGGGCC GGGACCTCCC GGTGCCGGGG CGCGAGCTCC GCGGGATACA CCTGGCCATG
GAGTACCTGG TGCAGCAGAA CCGGCGGGTG GCGGGCCTCC CGGTGGAGGG GGAGGAGATC
ACCGCCAGGG GCAAGCACGT GATCATCCTG GGCGGCGGGG ATACCAGCGC CGACTGCCTG
GGCAACGTCC ACCGCGAGGG GTGCGCCTCG GTGAGGGTGC TCACCCACGG CCCCAAGCCG
CCCGAGAGCC CCGACCCTTT GGAGTGGCCC GACTGGCCCT TCGTGCTGCA CACCTACCCC
GCCCACGAGG AGGGCGGCGA GCGCGGCTGG AACGTCGCTG TCACCGGCTT CTCCGGGGAG
GGCGGGCGCG TGAGGCGGAT GCACTGCGTC AGGACCCGGC GCGACCCCGA CGGCCGGACC
CACCACCTCC CCGGCACGGA GTTCGAGCTG GAGGCGGACC TGGTGCTGCT CGCCATCGGG
TTCACCGGGC CGGTGCGGGA CCGGCTGCTG GAGGAGCTGG GGGTGGAGTT CGGGCCGCGC
GGGGCGATCG CCACGCGGGA GGGCTTCGAC ACCGGCATCC CCGGCGTCTT CGTGGCGGGG
GACGCCCGCC GGGGGGCCGA CCTGATCGTG ACCGCCATCG CCGAGGGCCG CAAGGCCGCC
CGGCAGGTGG ACGCCTACCT CATGGGCCGC AGCCTGCTGC CCGGCTGA
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| Protein sequence | MGDPKGFLKI GRKPVPKRPV EERVRDYRWV YEPMPEGELR RQASRCMDCG VPFCNTGCPL
ANLIPDWNDL VYRDHWREAI DRLHATNNFP EFTGILCPAP CEAACVLSIN DRPVTIKEIE
RSIIERAFEE GWVVPKPPPP ERRTGKRVAV VGSGPAGLAA AQQLNRAGHS VVVFEKDDRP
GGLLRYGIPD FKMEKWVIDR RLRQLEEEGI EFRTGAYVGY DPTAEELRRG FDAVVLAVGA
LQGRDLPVPG RELRGIHLAM EYLVQQNRRV AGLPVEGEEI TARGKHVIIL GGGDTSADCL
GNVHREGCAS VRVLTHGPKP PESPDPLEWP DWPFVLHTYP AHEEGGERGW NVAVTGFSGE
GGRVRRMHCV RTRRDPDGRT HHLPGTEFEL EADLVLLAIG FTGPVRDRLL EELGVEFGPR
GAIATREGFD TGIPGVFVAG DARRGADLIV TAIAEGRKAA RQVDAYLMGR SLLPG
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