| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0339 |
|---|
| Symbol | |
|---|
| ID | 4116071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 361061 |
|---|
| End bp | 361894 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638035128 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_643127 |
|---|
| Protein GI | 108803190 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGTCG ACGAGCTGGT CGAGGAGTTC GCCGCCGTGC TGGCCGACGA CCCGGACACC
AGCCCGCGCA CCGCCGAGTT CTACGCCGCC GACCTCCGGG AGTTCGCCCG GTTTCTGGCG
GAGCGCGGGG TGGAGGAGGC CCGGGAGATA CGCGCCGGCC ACGTCATGGA GTTCCGGAAC
CACCTGCTGG AGGGGCGGCG CAAGCGGTTC ACCGTCTACA GGAAGGACGC CGCCGTCCGG
CGCTTTCTGG AGTGGGTGAG GACCTCCACC GACGCCGGCC TCGAGCTCGA CCCCATAGAG
CCCGTCCACC AGCCGCTCGA CCAGCGGATC GTCTTTCTGG AGGACGAGGA GGTCGACCAG
CTGCTCTCCT TCCCGCTCAA CCGCCGGGAG GACCTGCGCG ACGCCGCCGT CATCCGCCTC
ATGCTCGAGA CCGGGGTGAC CGTCGGCGAG ATCCGGGCCC TCCTCCGCTC GGACGTGGAC
CTGGAGGCCG GGCAGGTCAG GCTCGGGGGG CCCGGCTCCC ACCTCGCCCC GAGGACCCGC
AGGATCTCCC CGGAGACCGC GCGGGTGCTG CGGCGCTACC TCGAGTCCCG CGACGACGAC
ACGCCCGAGC TCATCGTGGG CCGGGCGGCG AGGCCCGTGG CCACCTCCAA GGCGCTCCAG
AACGCCGTCT GGAAGCGCTG CGAGCAGGTG GGCATGTGGA GAGTCTCCCC CATGAACCTG
CGCCACACCT TCGCCGTCCG GCTGCTCAGG CGCGGCGCCA CCCTGAACGA GCTCAGGGAG
GCCATGGGCG TGCGGGACAC CACCAACATC GGGGTGTACA GGAAGTTCGT CTAG
|
|---|
| Protein sequence | MRVDELVEEF AAVLADDPDT SPRTAEFYAA DLREFARFLA ERGVEEAREI RAGHVMEFRN
HLLEGRRKRF TVYRKDAAVR RFLEWVRTST DAGLELDPIE PVHQPLDQRI VFLEDEEVDQ
LLSFPLNRRE DLRDAAVIRL MLETGVTVGE IRALLRSDVD LEAGQVRLGG PGSHLAPRTR
RISPETARVL RRYLESRDDD TPELIVGRAA RPVATSKALQ NAVWKRCEQV GMWRVSPMNL
RHTFAVRLLR RGATLNELRE AMGVRDTTNI GVYRKFV
|
|---|
| |