Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0338 |
Symbol | |
ID | 4116070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 360389 |
End bp | 361012 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 638035127 |
Product | peptidase C60, sortase A and B |
Protein accession | YP_643126 |
Protein GI | 108803189 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGCA GCGCGCGCCC CACGACCGCC CTGCTCGCGG CGGCCCTGCT CTTTTTGCTC TTGGCCGCGG CCCCGGTCCT CCCGGAGACC GACGCCGCCT CGGTGCGCCT CGCGGAGCCC GCGCGGCTCC TCGGCGAGGG GGGCACCCTC CCCCCGGAGC GCGCCGCCCG GCCGGAGCCC CGGGGGGAGG CGCGCGGCGC GGCGATGACC CTCACCGTCC CGCGCCTGGG CATCCGCGAC CTCCCGGTGC CCACCGGCTC CACCCAGCGC GAGCTGGACC GGGAGGGCAT CCTGCACCTC GCGGGCACCG GCCCGCCGTG GCGGGAGGGC TCCAACACCT TCATAGCCGG GCACGCCCTG GGCTTCCGCC AGACGAGGGT CCCCTACGTC TTCTACCGGC TGGAGCGGCT GCGGCCGGGC GACGAGATCA TCGTCCGGGA CCGGAGGGGC GCGGCCTACG TCTTCAGGGT CTACGACCGG CTGACGGTCC GCCCGCAGGA CTACTGGGTA ACCTACCCGG TCGCGGAGCA GACCACGATC TCGCTGCAGA CCTGCGTCCC CGTCCCGACG TTCGAGCGGC GGCTGGTGGT GCGCGGCGAG CTCGTCCGGC GGCCCCCCGG TTAG
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Protein sequence | MFGSARPTTA LLAAALLFLL LAAAPVLPET DAASVRLAEP ARLLGEGGTL PPERAARPEP RGEARGAAMT LTVPRLGIRD LPVPTGSTQR ELDREGILHL AGTGPPWREG SNTFIAGHAL GFRQTRVPYV FYRLERLRPG DEIIVRDRRG AAYVFRVYDR LTVRPQDYWV TYPVAEQTTI SLQTCVPVPT FERRLVVRGE LVRRPPG
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