| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0318 |
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| Symbol | |
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| ID | 4114779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 341331 |
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| End bp | 343145 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638035107 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_643106 |
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| Protein GI | 108803169 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.464158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCGCC GCCACCGCCT CCCCCTCGGG GCGGAGTACC TCGGGGACGG GCGGACCCGC
TTCTCCCTCT GGGCCCCGGC GGCCTCCTCG GTGGAGCTCG TCCTCGAGGG CGGCTCGTCG
CGCATGGAGC GGGGCGAGGG CGGCGTCTTC TCCCTCACGA CCGGCGCCGC CCCCGGCGCC
CGCTACCGCT ACCGGATAGA CGGCGGGCAG GAGGTCCCCG ACCCGGCCTC CCGCTTCCAG
CCGGAGGACG TGCACGGCCC GAGCGCCGTC GTGGACCCGG CCTCCTTCGA GTGGGGCGAC
GGGGGCTGGC GGGGACGGCC CTGGCACGAG GCGGTCGTCT ACGAGCTGCA CGTGGGGACC
TTCTCCCCGG AGGGCACCTT CCGGGGGGCG TGCGAGCGGC TCGACCACCT CGCCGGACTC
GGCGTGACGG CCGTAGAGCT GATGCCGCTC GCGGACTTCC CCGGCTCCCG CAACTGGGGC
TACGACGGCG TGCTGCCCTA CGCCCCCGAC TCCTCCTACG GGACGCCGGA GGAGCTCAAG
GAGCTGGTGC AGGCCGCGCA CGGGCGGGGG ATCATGGTCC TCCTCGACGT GGTCTACAAC
CACTTCGGGC CGGAGGGCAA CTACCTCCCC CTGTACGCGC CGCGGTTCTT CACCGAGAGG
CACGCCACGC CGTGGGGGGC GGCGGTCAAC TTCGACGATG CGGGCAGCGA GACGGTGCGC
GAGTTCTTCG TGCACAACGC GCTCTACTGG ATCGAGGAGT ACGGCTTCGA CGGCCTCAGG
CTCGACGCCG TCCACGCCAT AAGGGACGAC TCGGGGCGGC ACTTCCTCGC AGAGCTCGCG
GAGCGCATAA GGGGCGGCCC CGGGCGCGGG CGGCGCGTGC ACCTCGTCCT CGAGAACGAG
GAGAACGAGG CCTCCCTGCT GCGCCCGGCC GGCGAGGGGC GCAGCCTCTA CGACGCGCAG
TGGAACGACG ACCTCCACCA CGCCCTGCAC GTCGCGCTCA CCGGCGAGGA CGCCGCCTAC
TACGCCGACT ACGCCGACGC TCCGGTGCGG CACCTGGGGA GGTGCCTCGC CGAGGGCTTC
GCCTACCAGG GCGACCCCTC GCGCCACCGC GGCGACAGGA GGGGCGAGCC GAGCGCCGAC
CTCGCGCCGC CCGCGTTCGT CGCCTTCCTG CAGAACCACG ACCAGGTCGG CAACCGCGCC
TTCGGGGAGC GCATAACCGA CCTCGCCTCC CCGGAGGCGG TGCGGGCGGC CGCGGCGGTC
TACCTGCTCT CCCCGCAGGT CCCGATGCTC TTTATGGGGG AGGAGTGGGG CGCCTCCTCG
CCGTTCCTCT TCTTCTGCGA CTTCGGGGGG GACCTCGCCC CGCTCGTTAC GCAGGGGCGG
CGCGAGGAGT TCGCCTCCTT CCCCGAGTTC TCCGACCCCG AGACGCGCGG GCGCATCCCC
GACCCGAACG CGCCGGGGAC GTTCGGGGCC TCGAGGCTCG ACTGGGGCGA GCGGGAGGCG
CCGGAGCACG CGAGGTGGCT CGACCTCTAC CGCGAACTGC TCGCGCTGCG CCGGGAGAGG
ATAGTGCCCC TCCTCTCCGG CGCTCCGGGC GGCGGGGGGC GCTACCGGCT CGTCGGCGAG
CGGGGGCTGG AGGTGCGCTG GGGCCTCGGG GGCGGGGCGC GCCTGGCGCT GCGCGCGAAC
CTGGGGCCGG AGCCGCTCGG GGGCTTCGGG TTGCCCGAGG GGGACCTGCT CTACGCCACG
GAGGGGGCGG AGGCCGCCGG CCGGCGGCTT CCGGGCTGGG CCGCCGTCTG GCACCTGGCG
GGGGCCGGCG CGTGA
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| Protein sequence | MIRRHRLPLG AEYLGDGRTR FSLWAPAASS VELVLEGGSS RMERGEGGVF SLTTGAAPGA
RYRYRIDGGQ EVPDPASRFQ PEDVHGPSAV VDPASFEWGD GGWRGRPWHE AVVYELHVGT
FSPEGTFRGA CERLDHLAGL GVTAVELMPL ADFPGSRNWG YDGVLPYAPD SSYGTPEELK
ELVQAAHGRG IMVLLDVVYN HFGPEGNYLP LYAPRFFTER HATPWGAAVN FDDAGSETVR
EFFVHNALYW IEEYGFDGLR LDAVHAIRDD SGRHFLAELA ERIRGGPGRG RRVHLVLENE
ENEASLLRPA GEGRSLYDAQ WNDDLHHALH VALTGEDAAY YADYADAPVR HLGRCLAEGF
AYQGDPSRHR GDRRGEPSAD LAPPAFVAFL QNHDQVGNRA FGERITDLAS PEAVRAAAAV
YLLSPQVPML FMGEEWGASS PFLFFCDFGG DLAPLVTQGR REEFASFPEF SDPETRGRIP
DPNAPGTFGA SRLDWGEREA PEHARWLDLY RELLALRRER IVPLLSGAPG GGGRYRLVGE
RGLEVRWGLG GGARLALRAN LGPEPLGGFG LPEGDLLYAT EGAEAAGRRL PGWAAVWHLA
GAGA
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