| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0317 |
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| Symbol | |
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| ID | 4114778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 339187 |
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| End bp | 341334 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638035106 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_643105 |
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| Protein GI | 108803168 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGAGC AGCGCAGCGT GGTCTGGCCC GGCGAACCCT ACCCGCTCGG GGCCACCTGG
GACGGGGAGG GGGTCAACTT CGCCCTCTTC TCCGAGAACG CCGAGAGGGT CGAGCTCTGC
CTCTTCGACC CCTCGGGCAG GAGGGAGGTC GAGCGCATAG AGCTCCGGGA GCAGACCGAC
CAGATCTGGC ACTGCTACCT GCCCTACGGG CGGCTCGGCC AGCTCTACGG CTACCGGGTC
TACGGGCCCT ACGACCCCGA GAACGGCCAC CGGTTCAACC CCAACAAGCT CCTCCTCGAC
CCCTACGCCA AGTCCATCGC GGGCAGCCTG GACTGGCGGC ACCCCCACTT CGGCTACAGG
CCCGGCGAGG ACGACCTCTC CTTCGACGAG CGGGACAACG CCGCCGGGGC CCTCAAGTGC
CGCGTGGTGG ACACCGCCTT CACCTGGGGC GACGACCGCC CCCCCAGGAC GCCCTGGCAC
GACACCATAA TCTACGAGCT GCACGTAAAG GGCTTCACCC GGCTCCACCC CGAGATCCCA
CCCCACCTGC GCGGCACCTA CGCCGGGCTG GCCTCGGCCC CGGCCATAGA GCACCTGAAG
CGGCTCGGCG TCACCGCCGT GGAGCTGATG CCCGTCCACT TCTTTGTCGA CGACAAGCAC
CTCCTGGACA GGGGCCTCAG AAACTACTGG GGCTACAACT CCATCGGCTT CTTCGCCCCC
GACGCCCGCT ACTCGGCCAC CGGCTCCATA AACGAGTTCA AGACCATGGT CAAGAGGCTC
CACTCCGCGG GGCTGGAGGT GATCCTGGAC GTCGTCTACA ACCACACCGC CGAGGGCAAC
CACCTGGGCC CCACGCTCTC CTTCCGGGGG ATAGACAACG CCGCCTACTA CCGGCTCGTC
CCCGACGACC GGCGCTACTA CATGGACTAC ACCGGCACCG GCAACACCCT CAACATGATG
CACCCGCGCG TCCTGCAGCT CATCATGGAC TCGCTGCGCT ACTGGATCCT GGAGATGCAC
GTCGACGGCT TCCGCTTCGA CCTGGCGAGC GCGCTCGCCC GCGAGCTGCA CGACGTGGAC
AAGCTCTCCG CCTTCTTCGA CATCATCCGG CAGGACCCGG TGATCTCGCA GGTCAAGCTC
ATCGCCGAGC CCTGGGACGT GGGGGAGGGC GGCTACCAGG TCGGGAACTT CCCGGTGGGC
TGGACGGAGT GGAACGGCAA GTACCGCGAC GCGGTCCGCT CCTACTGGAA GGGCGACGGC
GGGCTGGTGG ACGAGCTGGC CTACCGCCTG ACCGGCTCCT CGGACCTCTA CGAGCGCGAC
GGACGCCGCC CCTACGCCTC CATCAACTTC GTCACCGCCC ACGACGGCTT CACCCTGCAG
GACCTCGTCA GCTACAACGA GAAGCACAAC GAGGCCAACG GCGAGGACAA CCGGGACGGC
CACGACGACA ACCGCAGCTG GAACTGCGGG GTGGAGGGCC CCACGGGCGA CAGGGGCATC
CGCCGCCTGC GGGCCCGCCA GAAGCGCAAC CTCATGGCCA CCCTCCTGCT CTCCCAGGGG
GTGCCCATGA TCCTCCACGG CGACGAGATG GGCCGCACCC AGAACGGCAA CAACAACGCC
TACTGCCAGG ACAACGAGAC GAGCTGGGTG AGCTGGAACC TCGCCCCCGC CGACCGCAAC
TTCCTGGCCT TCGTGCGGCG CATGATCCGC CTGCGCCGCG AGCACCCCAT CTTCCGCCGC
CGCAGCTTCT TCCAGGGCCG CCGGCTGCGG GGCGCGGGGG TGAAGGACAT CACCTGGCTC
ACCCCCGACG GGGACGAGAT GACCGACGAG GAGTGGGCGA GCTCCTTCGC CCGCTCCCTG
GGGCTGCAGA TGTCCGGCAT CCTCGAGGGG GAGGTGGACG CGCAGGGGCG GCAGATCCAG
GACGACGACT TCCTGCTGCT CCTCAACGCC CACCACGAGG ACCTGAGCTT CGTCCTCCCC
CCCGTCCCGG AGGACGCCCG CTGGGAGGCG GTGGTGGACA CCGCCCACGC CGCCGGGCTG
AAGCCCGCCG GCTTCTACAA GCCCGGCGAC GCCTACCCCC TGAAGGCCCG CTCGATGGCG
GTGCTCGCCA ACGCCCGCCG CGAGGCGCCG GAGGAGGAGG AAGAGTGA
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| Protein sequence | MSEQRSVVWP GEPYPLGATW DGEGVNFALF SENAERVELC LFDPSGRREV ERIELREQTD
QIWHCYLPYG RLGQLYGYRV YGPYDPENGH RFNPNKLLLD PYAKSIAGSL DWRHPHFGYR
PGEDDLSFDE RDNAAGALKC RVVDTAFTWG DDRPPRTPWH DTIIYELHVK GFTRLHPEIP
PHLRGTYAGL ASAPAIEHLK RLGVTAVELM PVHFFVDDKH LLDRGLRNYW GYNSIGFFAP
DARYSATGSI NEFKTMVKRL HSAGLEVILD VVYNHTAEGN HLGPTLSFRG IDNAAYYRLV
PDDRRYYMDY TGTGNTLNMM HPRVLQLIMD SLRYWILEMH VDGFRFDLAS ALARELHDVD
KLSAFFDIIR QDPVISQVKL IAEPWDVGEG GYQVGNFPVG WTEWNGKYRD AVRSYWKGDG
GLVDELAYRL TGSSDLYERD GRRPYASINF VTAHDGFTLQ DLVSYNEKHN EANGEDNRDG
HDDNRSWNCG VEGPTGDRGI RRLRARQKRN LMATLLLSQG VPMILHGDEM GRTQNGNNNA
YCQDNETSWV SWNLAPADRN FLAFVRRMIR LRREHPIFRR RSFFQGRRLR GAGVKDITWL
TPDGDEMTDE EWASSFARSL GLQMSGILEG EVDAQGRQIQ DDDFLLLLNA HHEDLSFVLP
PVPEDARWEA VVDTAHAAGL KPAGFYKPGD AYPLKARSMA VLANARREAP EEEEE
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