| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0316 |
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| Symbol | |
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| ID | 4114777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 336928 |
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| End bp | 339096 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035105 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_643104 |
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| Protein GI | 108803167 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGACGCG AAGAGGCCAT CCGCGCCGTG GTCGCCGGCG ACCACCCCGA CCCCTTCTCC
TTTCTGGGGC CGCACGAGGA GGCGGGCCGG CGGGTGGTGA GGACCTTCCT GCCCGGCGCG
GCGCGGGTGC GGGTGCTCTC CGCCGCCGGC CGGCCGCTGG GAGAGCTGGA GCGCGTCCAC
CCGGAGGGGT TCTTCTCCGG CCCCCTCTCC GGCAACGGCC GCTACCGGCT GCGGGTCCTC
TGGGAGGGCG GGGGGGAGGA CGAGCTCGAG GACCCCTACC GGTTCCCGCC CGTCCTCAGC
GACTACGACC TCTACCTCTT CGGCGAGGGG AACAACCACC GCATCTACCG GCACCTCGGG
GCCCACCCGG CGGAGATGGA CGGCGTCTGC GGCACCGCCT TCGCCGTCTG GGCCCCCAAC
GCCCGCAGGG TCTCGGTCGT CGGGGACTTC AACCTCTGGG ACGGCCGGCG GCACCCCATG
CGCAACCGCA ACGGGGTGTG GGAGATCTTC TTGCCCGGCG TGGGGCCCGG GGCCCTCTAC
AAGTACGAGA TAAAGGACGC GGGCGGCTCC CTGCTTCCGC TCAAGGCCGA CCCCTACGGC
TTCTTCGCCG AGCAGTACCC GGGCACCGCC TCCATCGTCT GGGATCTCTC CCGCCACCGG
TGGGAGGACG GGGAGTGGAT GGAGCGGCGG GGGAGCAGGA ACGCCCCGGA TGCCCCCATG
GCCATCTACG AGGTTCACCT GGGCTCCTGG CGCCGCCGCC CGGACGGCTC CCACCTCACC
TACCGCGAGC TGGCCGAGGA GCTCGTCCCC TACGTCGCCG GGCTCGGCTA CACCCACGTC
GAGCTCCTGC CGCCCATGGA GCACCCCTTC GGAGGCTCGT GGGGCTACCA GCCCGTGGGG
CTCTTCGCCC CCACCAGCCG CTTCGGGCCG CCCGAGGACT TCAAGCACCT GGTGGACGCC
TTCCACCGGG CGGGCGTCGG GGTCATCGCG GACTGGGTCC CGGCCCACTT CCCCGAGGAC
GCCCACGGCC TCGCCCGCTT CGACGGCACC CACCTCTACG AGCACGCCGA CCCCCGCAAG
GGGCGCCACC CGGACTGGGG CACCCTCATC TACAACTACG GGCGCAACGA GGTGCGCAAC
TTCCTCATCT CCAACGCCCT CTTCTGGCTC GACGAGTACC ACATCGACGG CCTCAGGGTG
GACGCCGTGG CCTCCATGCT CTACCTGGAC TACTCCCGGA AGGAGGGCGA GTGGGTCCCC
AACGAGCACG GGGGCAACGA GAACCTGGAG GCCATAGCCT TTCTGCGGCG GATGAACGAG
GTGGTCTACG GGGAGGCGCC GGGGGCCTTC ACCGTCGCCG AGGAGTCCAC CGCCTGGCCG
ATGGTCTCCC GGCCCACCTA CATGGGGGGG CTGGGCTTCG GCTACAAGTG GAACATGGGC
TGGATGCACG ACACCCTGCA GTACATGAAG GAGGACCCCG TCCACCGCCG GTACCACCAC
GACAGGATCA CCTTCGGCCT CCTCTACGCC TTCAACGAGA ACTTCATCCT GCCGCTCTCC
CACGACGAGG TGGTGCACGG CAAGGGCTCG CTCCTGGGGA GGATGCCCGG CGACCGGTGG
CAGCGCTTCG CCAACCTGCG CGCCTACTAC GGCTTCATGT ACGGCCACCC CGGCAAGCAG
CTGCTCTTCA TGGGCGGGGA GTTCGCCCAG GAGCGGGAGT GGGACAGCGG CTCCCAGCTG
GACTGGCACC TGCTGGAGGG GGGCGAAAAC CGGGGCGTGC GCGACCTCGT CGCCGACCTC
AACGCCCTCT ACCGCGCCAC CCCCGCCCTG CACCAGGTGG ACTTCGAGCC GGAGGGCTTC
GAGTGGGTGG AGGGCGGCGA CGCCGAGCAG AGCGTGGTCT CTTTTCTGCG CCGCGCCCGC
AACCCGGAGG ACTTCGTGCT CGTGGTCTCC AACTTCACCC CGGTCGTCCG GCACGGCTAC
CGGGTCGGGG TGCCCGCCTC CGGACCCTAC GCCGAGGTGC TCAACACCGA CGACCCCCGC
TACGGCGGCA GCGGGGTGGC AAACGGCGAG CTCGAGGCCG AGGAGGTCCC CTGGCACGGC
AGGCCCTTCT CCCTCCGGCT CACCCTCCCG CCGCTGGCCA CCGTCTTCCT GCGCCCCCGC
CCGGTGTAG
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| Protein sequence | MRREEAIRAV VAGDHPDPFS FLGPHEEAGR RVVRTFLPGA ARVRVLSAAG RPLGELERVH
PEGFFSGPLS GNGRYRLRVL WEGGGEDELE DPYRFPPVLS DYDLYLFGEG NNHRIYRHLG
AHPAEMDGVC GTAFAVWAPN ARRVSVVGDF NLWDGRRHPM RNRNGVWEIF LPGVGPGALY
KYEIKDAGGS LLPLKADPYG FFAEQYPGTA SIVWDLSRHR WEDGEWMERR GSRNAPDAPM
AIYEVHLGSW RRRPDGSHLT YRELAEELVP YVAGLGYTHV ELLPPMEHPF GGSWGYQPVG
LFAPTSRFGP PEDFKHLVDA FHRAGVGVIA DWVPAHFPED AHGLARFDGT HLYEHADPRK
GRHPDWGTLI YNYGRNEVRN FLISNALFWL DEYHIDGLRV DAVASMLYLD YSRKEGEWVP
NEHGGNENLE AIAFLRRMNE VVYGEAPGAF TVAEESTAWP MVSRPTYMGG LGFGYKWNMG
WMHDTLQYMK EDPVHRRYHH DRITFGLLYA FNENFILPLS HDEVVHGKGS LLGRMPGDRW
QRFANLRAYY GFMYGHPGKQ LLFMGGEFAQ EREWDSGSQL DWHLLEGGEN RGVRDLVADL
NALYRATPAL HQVDFEPEGF EWVEGGDAEQ SVVSFLRRAR NPEDFVLVVS NFTPVVRHGY
RVGVPASGPY AEVLNTDDPR YGGSGVANGE LEAEEVPWHG RPFSLRLTLP PLATVFLRPR
PV
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