Gene Rxyl_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0315 
Symbol 
ID4114776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp333566 
End bp336931 
Gene Length3366 bp 
Protein Length1121 aa 
Translation table11 
GC content71% 
IMG OID638035104 
Producttrehalose synthase-like protein 
Protein accessionYP_643103 
Protein GI108803166 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis 
TIGRFAM ID[TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA CGGCCCGCAG GGGGGCGGCG CGCCGGGAGG AGGCCTACCG GGAGGACCCG 
CTCTGGTACA AGGACGCCAT CATCTACCAG CTGCACGTAA AGGCCTTCTT CGACTCGGAC
AACGACGGCA TCGGGGACTT CAGGGGCCTG ACGCAGCGGC TGGAGTACAT AAAAGACCTC
GGGGTCAACG CCATCTGGCT CATGCCCTTC TACCCCTCCC CGATGCGCGA CGACGGCTAC
GACATCTCCG AGTACAAGAA CGTCCACCCC GAGTACGGCA CCCGCCGCGA CTTCCGCAAC
TTCGTGCGCC GGGCGCACGC CCTGGGCCTC AAGGTCATAA CCGAGCTGGT CATAAACCAC
ACCTCCGATG CGCACCCCTG GTTCCAGCGG GCCAGAAAGG CGCCCAGGAA CTCCGTCTGG
CGCAACTTCT ACGTCTGGAG CGACACCGAC AAGAAGTACG CCGACGCCCG GATCATCTTC
ACCGACACCG AGACCTCCAA CTGGACCTGG GACCCGGTCG CCCAGCAGTA CTACTGGCAC
CGGTTCTTCA GCCACCAGCC GGACCTCAAC CACGACAACC CCCGGGTCTT CGACGCCATC
ATGCGGGTGA TGCGCTTCTG GCTGGACGCC GGGGTGGACG GGCTGAGGCT GGACGCCATC
CCCTACCTCA TAGAGCGCGA GGGGACCGAC TGCGAGAACC TCCCGGAGAC CCACGAGATC
CTCAGGCGGA TGAGGGCCGA GCTGGACGCC CGCTACCAGA ACAGGATCTT CCTGGCCGAG
GCCAACCAGT GGCCGGAGGA CGTGCTGCCG TACTTCGGGA AGGGCGACGA GTGCCACATG
GCCTTCCACT TCCCCCTGAT GCCCAGGATC TACATGGCCG TGGCGCAGGA GGACCGGCAC
CCCATCGTGG AGATCATGCA GCAGACCCCG GAGATCCCCG AGGTCTGCCA GTGGGCCATC
TTCCTCAGAA ACCACGACGA GCTGACGCTG GAGATGGTCA CCGACCGCGA GCGGGACTAC
ATGTACCAGA CCTACGCCGC CGACCCCCGC GCCCGGATAA ACCTGGGCAT CCGGCGCCGG
CTCGCCCCCC TCATGGAGAA CGACCGGGCC CGCATAGAGC TGCTCAACAG CCTGCTCATG
AGCATGCCCG GCACCCCCAT CATCTACTAC GGGGACGAGA TCGGGATGGG GGACAACGTC
TTCCTCGGGG ACCGCAACGC GGTGCGCACG CCCATGCAGT GGACCTCCGA CCGCAACGCG
GGCTTCTCCC GGGCCGACCC CCACAGCCTC TACCTGCCCC CGATCATGGA CCCGGTCTAC
GGCTACGAGG CCCTCAACGT GGAGGCCCAG AGCCGCAGCC CGGGCTCGCT GCTGAACTGG
ATGAAGCGGA TCATCGCGGT GCGCAAGGCC CACAAGGCCT TCGGGCGGGG GACGCTGGAG
TTCTTGCACC CCGGCAACCG GAAGGTGCTG GCCTATTTGC GGGAGTACGG GGACGAGACG
ATCCTCTGCG TGGCCAACCT CTCCCGCTCC GCCCAGCCGG TGGAGCTGGA CCTCTCCCGG
TTCAGCGGGC GGGTGCCGGT CGAGATGATC GGGGGGAGCA GCTTCCCGCC CATCGGCTCG
CTGCCGTACT TCCTCACCCT CCCCGGGCAC AGCTTCTACT GGTTCAACCT CACCACCGAG
GCCGAGGCCC CGAGCTGGCA CCAGGAGAGC CCCCGCTTCT TCGAGCCGCC GGTGGTGGTG
CTGCCCGCCG GCCGCCAGAC GGCCCGGGAC ATCCGCCGGC TGCCGCTGCG CCTGCAGCAC
CGCCAGGTGG CGCAGCTGGA GCAGGAGGCG CTGCCGGCCT TCCTGAGCGT CCGGCGGTGG
TTCGCGGCGA AGGGCAGCGA GATAGAGCGG GTGAGCCTCC TCGCCCGGGC GGAGTTCGGC
CCGGACCGCC TGCTGGCGCT GCTGCGGGTG GGGGCCGGGG GCGCCGAACA CACCTACTTC
CTGCCGCTCG CCGCCGCCTG GGAGGACGAG GACGGCGAGC GGGTCTCGGG CCTCATGCCG
CACGCCCTGG CCAAGATCCG GCGCCGCTAC CGGGTCGGCG TCCTCTTCGA CGCGCTCGCG
GACGAGGGCT TCTGCCGGGA GGTGGTCGCC GCGATGGCCG GGGGGCGGGA GCTGGAGATG
GGGGAGGGGC GGGTGCGCTT CTACGCCACC GGCGCCCTCG AGGAGCTGCT GGCGGGGGAG
CCGGTGGGGG AGCTCGCGGT CCGGCGGGCC TCGGTGGAGC AGAGCAACAC CTCGGTGATC
CTGGGCGAGC GGCTGGTGCT GAAGGCCTAC CGCCGGCTGC AGCCGGGCGT CAACCCGGAG
CTGGAGATCG GGCGCTACCT CACCGAGGTG CGGCGCTTCC CGAACACCCC GCCGCTCGCG
GGGGCCGTGG AGTACGAGGA CCCGCGCTCG GGGACGGTCT CCCTGGCCCT CCTGCAGGGC
TTCGTCCCCA GCCAGGGCGA CGGCTGGTCC TACGTGCTGG GCTACCTGGA CCGCTACCTG
GAGCGGCGCC TGCTCTCCGC CTCCTGGAGC CCGGAGGAGG AGGGCCCGGC GGAGCCCCCC
GGGCAGGAGG GTCAGGAGGC CGACGAGGGC TTTTTCATGG AGCTGATGCG GACCCTCGGG
GTGCGCACCG GCGAGCTGCA CGCTGCCCTG GCCGCCCCCA CCGACGACCC CTCCTTCTCC
CCCGAGCCCG CCCCGCCCGC GGAGGTCTCC CGCTGGGTCG AGGCCGTGCT GGACGACCTG
CGGCTCACCC TGAGCCTCCT GGAGCGCCGC CGGTCCGGGC TGCCAGAGGA GGTGCGCCCC
GAGGTGGACC GCCTGCTCCG GATGGAGGCC CGGGCCTTCG ACCGGCTGGA GGCGATCTCC
GCCCGGGGGA TACGGGCCGT GAAGACCCGC CACCACGGGG ACTACCACCT CGGGCAGGTG
CTCGTCGCCG GGAACGACTT CCAGATCATA GACTTCGAGG GCGAGCCCGC CCGCACCCTG
GAGGAGCGCC GCCGCAAGCA CTCCCCTCTG CGCGACGTGG CCGGCATGCT CCGCTCCTTC
GACTACGCCG CCCAGACCGC CCTGATGAAC CTGGGGGCCG ACCGGGCCGT CGGGGAGGAC
CCGGAGCCCG TGGTGCGCCG CTGGGAGCGG AGCGTGCGGG AGGCCTTCCT CGGGGGCTAC
GCCGAGGGCG TGCGGGGCGC CGGGGTCCTC CCGGGGGAGG GCGAGGAGGC CGCCGCCCTC
GTCGAGCTTT TCGCCCTGGA GAAGGCGCTC TACGAGATCC GCTACGAGCT GGACAACCGC
CCGGACTGGA TCGGGATACC GGTCCGGGGC GTCCTGGACC TTCTGACGAG GGAGGAGAGC
CCGTGA
 
Protein sequence
MTQTARRGAA RREEAYREDP LWYKDAIIYQ LHVKAFFDSD NDGIGDFRGL TQRLEYIKDL 
GVNAIWLMPF YPSPMRDDGY DISEYKNVHP EYGTRRDFRN FVRRAHALGL KVITELVINH
TSDAHPWFQR ARKAPRNSVW RNFYVWSDTD KKYADARIIF TDTETSNWTW DPVAQQYYWH
RFFSHQPDLN HDNPRVFDAI MRVMRFWLDA GVDGLRLDAI PYLIEREGTD CENLPETHEI
LRRMRAELDA RYQNRIFLAE ANQWPEDVLP YFGKGDECHM AFHFPLMPRI YMAVAQEDRH
PIVEIMQQTP EIPEVCQWAI FLRNHDELTL EMVTDRERDY MYQTYAADPR ARINLGIRRR
LAPLMENDRA RIELLNSLLM SMPGTPIIYY GDEIGMGDNV FLGDRNAVRT PMQWTSDRNA
GFSRADPHSL YLPPIMDPVY GYEALNVEAQ SRSPGSLLNW MKRIIAVRKA HKAFGRGTLE
FLHPGNRKVL AYLREYGDET ILCVANLSRS AQPVELDLSR FSGRVPVEMI GGSSFPPIGS
LPYFLTLPGH SFYWFNLTTE AEAPSWHQES PRFFEPPVVV LPAGRQTARD IRRLPLRLQH
RQVAQLEQEA LPAFLSVRRW FAAKGSEIER VSLLARAEFG PDRLLALLRV GAGGAEHTYF
LPLAAAWEDE DGERVSGLMP HALAKIRRRY RVGVLFDALA DEGFCREVVA AMAGGRELEM
GEGRVRFYAT GALEELLAGE PVGELAVRRA SVEQSNTSVI LGERLVLKAY RRLQPGVNPE
LEIGRYLTEV RRFPNTPPLA GAVEYEDPRS GTVSLALLQG FVPSQGDGWS YVLGYLDRYL
ERRLLSASWS PEEEGPAEPP GQEGQEADEG FFMELMRTLG VRTGELHAAL AAPTDDPSFS
PEPAPPAEVS RWVEAVLDDL RLTLSLLERR RSGLPEEVRP EVDRLLRMEA RAFDRLEAIS
ARGIRAVKTR HHGDYHLGQV LVAGNDFQII DFEGEPARTL EERRRKHSPL RDVAGMLRSF
DYAAQTALMN LGADRAVGED PEPVVRRWER SVREAFLGGY AEGVRGAGVL PGEGEEAAAL
VELFALEKAL YEIRYELDNR PDWIGIPVRG VLDLLTREES P