Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0315 |
Symbol | |
ID | 4114776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 333566 |
End bp | 336931 |
Gene Length | 3366 bp |
Protein Length | 1121 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638035104 |
Product | trehalose synthase-like protein |
Protein accession | YP_643103 |
Protein GI | 108803166 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA CGGCCCGCAG GGGGGCGGCG CGCCGGGAGG AGGCCTACCG GGAGGACCCG CTCTGGTACA AGGACGCCAT CATCTACCAG CTGCACGTAA AGGCCTTCTT CGACTCGGAC AACGACGGCA TCGGGGACTT CAGGGGCCTG ACGCAGCGGC TGGAGTACAT AAAAGACCTC GGGGTCAACG CCATCTGGCT CATGCCCTTC TACCCCTCCC CGATGCGCGA CGACGGCTAC GACATCTCCG AGTACAAGAA CGTCCACCCC GAGTACGGCA CCCGCCGCGA CTTCCGCAAC TTCGTGCGCC GGGCGCACGC CCTGGGCCTC AAGGTCATAA CCGAGCTGGT CATAAACCAC ACCTCCGATG CGCACCCCTG GTTCCAGCGG GCCAGAAAGG CGCCCAGGAA CTCCGTCTGG CGCAACTTCT ACGTCTGGAG CGACACCGAC AAGAAGTACG CCGACGCCCG GATCATCTTC ACCGACACCG AGACCTCCAA CTGGACCTGG GACCCGGTCG CCCAGCAGTA CTACTGGCAC CGGTTCTTCA GCCACCAGCC GGACCTCAAC CACGACAACC CCCGGGTCTT CGACGCCATC ATGCGGGTGA TGCGCTTCTG GCTGGACGCC GGGGTGGACG GGCTGAGGCT GGACGCCATC CCCTACCTCA TAGAGCGCGA GGGGACCGAC TGCGAGAACC TCCCGGAGAC CCACGAGATC CTCAGGCGGA TGAGGGCCGA GCTGGACGCC CGCTACCAGA ACAGGATCTT CCTGGCCGAG GCCAACCAGT GGCCGGAGGA CGTGCTGCCG TACTTCGGGA AGGGCGACGA GTGCCACATG GCCTTCCACT TCCCCCTGAT GCCCAGGATC TACATGGCCG TGGCGCAGGA GGACCGGCAC CCCATCGTGG AGATCATGCA GCAGACCCCG GAGATCCCCG AGGTCTGCCA GTGGGCCATC TTCCTCAGAA ACCACGACGA GCTGACGCTG GAGATGGTCA CCGACCGCGA GCGGGACTAC ATGTACCAGA CCTACGCCGC CGACCCCCGC GCCCGGATAA ACCTGGGCAT CCGGCGCCGG CTCGCCCCCC TCATGGAGAA CGACCGGGCC CGCATAGAGC TGCTCAACAG CCTGCTCATG AGCATGCCCG GCACCCCCAT CATCTACTAC GGGGACGAGA TCGGGATGGG GGACAACGTC TTCCTCGGGG ACCGCAACGC GGTGCGCACG CCCATGCAGT GGACCTCCGA CCGCAACGCG GGCTTCTCCC GGGCCGACCC CCACAGCCTC TACCTGCCCC CGATCATGGA CCCGGTCTAC GGCTACGAGG CCCTCAACGT GGAGGCCCAG AGCCGCAGCC CGGGCTCGCT GCTGAACTGG ATGAAGCGGA TCATCGCGGT GCGCAAGGCC CACAAGGCCT TCGGGCGGGG GACGCTGGAG TTCTTGCACC CCGGCAACCG GAAGGTGCTG GCCTATTTGC GGGAGTACGG GGACGAGACG ATCCTCTGCG TGGCCAACCT CTCCCGCTCC GCCCAGCCGG TGGAGCTGGA CCTCTCCCGG TTCAGCGGGC GGGTGCCGGT CGAGATGATC GGGGGGAGCA GCTTCCCGCC CATCGGCTCG CTGCCGTACT TCCTCACCCT CCCCGGGCAC AGCTTCTACT GGTTCAACCT CACCACCGAG GCCGAGGCCC CGAGCTGGCA CCAGGAGAGC CCCCGCTTCT TCGAGCCGCC GGTGGTGGTG CTGCCCGCCG GCCGCCAGAC GGCCCGGGAC ATCCGCCGGC TGCCGCTGCG CCTGCAGCAC CGCCAGGTGG CGCAGCTGGA GCAGGAGGCG CTGCCGGCCT TCCTGAGCGT CCGGCGGTGG TTCGCGGCGA AGGGCAGCGA GATAGAGCGG GTGAGCCTCC TCGCCCGGGC GGAGTTCGGC CCGGACCGCC TGCTGGCGCT GCTGCGGGTG GGGGCCGGGG GCGCCGAACA CACCTACTTC CTGCCGCTCG CCGCCGCCTG GGAGGACGAG GACGGCGAGC GGGTCTCGGG CCTCATGCCG CACGCCCTGG CCAAGATCCG GCGCCGCTAC CGGGTCGGCG TCCTCTTCGA CGCGCTCGCG GACGAGGGCT TCTGCCGGGA GGTGGTCGCC GCGATGGCCG GGGGGCGGGA GCTGGAGATG GGGGAGGGGC GGGTGCGCTT CTACGCCACC GGCGCCCTCG AGGAGCTGCT GGCGGGGGAG CCGGTGGGGG AGCTCGCGGT CCGGCGGGCC TCGGTGGAGC AGAGCAACAC CTCGGTGATC CTGGGCGAGC GGCTGGTGCT GAAGGCCTAC CGCCGGCTGC AGCCGGGCGT CAACCCGGAG CTGGAGATCG GGCGCTACCT CACCGAGGTG CGGCGCTTCC CGAACACCCC GCCGCTCGCG GGGGCCGTGG AGTACGAGGA CCCGCGCTCG GGGACGGTCT CCCTGGCCCT CCTGCAGGGC TTCGTCCCCA GCCAGGGCGA CGGCTGGTCC TACGTGCTGG GCTACCTGGA CCGCTACCTG GAGCGGCGCC TGCTCTCCGC CTCCTGGAGC CCGGAGGAGG AGGGCCCGGC GGAGCCCCCC GGGCAGGAGG GTCAGGAGGC CGACGAGGGC TTTTTCATGG AGCTGATGCG GACCCTCGGG GTGCGCACCG GCGAGCTGCA CGCTGCCCTG GCCGCCCCCA CCGACGACCC CTCCTTCTCC CCCGAGCCCG CCCCGCCCGC GGAGGTCTCC CGCTGGGTCG AGGCCGTGCT GGACGACCTG CGGCTCACCC TGAGCCTCCT GGAGCGCCGC CGGTCCGGGC TGCCAGAGGA GGTGCGCCCC GAGGTGGACC GCCTGCTCCG GATGGAGGCC CGGGCCTTCG ACCGGCTGGA GGCGATCTCC GCCCGGGGGA TACGGGCCGT GAAGACCCGC CACCACGGGG ACTACCACCT CGGGCAGGTG CTCGTCGCCG GGAACGACTT CCAGATCATA GACTTCGAGG GCGAGCCCGC CCGCACCCTG GAGGAGCGCC GCCGCAAGCA CTCCCCTCTG CGCGACGTGG CCGGCATGCT CCGCTCCTTC GACTACGCCG CCCAGACCGC CCTGATGAAC CTGGGGGCCG ACCGGGCCGT CGGGGAGGAC CCGGAGCCCG TGGTGCGCCG CTGGGAGCGG AGCGTGCGGG AGGCCTTCCT CGGGGGCTAC GCCGAGGGCG TGCGGGGCGC CGGGGTCCTC CCGGGGGAGG GCGAGGAGGC CGCCGCCCTC GTCGAGCTTT TCGCCCTGGA GAAGGCGCTC TACGAGATCC GCTACGAGCT GGACAACCGC CCGGACTGGA TCGGGATACC GGTCCGGGGC GTCCTGGACC TTCTGACGAG GGAGGAGAGC CCGTGA
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Protein sequence | MTQTARRGAA RREEAYREDP LWYKDAIIYQ LHVKAFFDSD NDGIGDFRGL TQRLEYIKDL GVNAIWLMPF YPSPMRDDGY DISEYKNVHP EYGTRRDFRN FVRRAHALGL KVITELVINH TSDAHPWFQR ARKAPRNSVW RNFYVWSDTD KKYADARIIF TDTETSNWTW DPVAQQYYWH RFFSHQPDLN HDNPRVFDAI MRVMRFWLDA GVDGLRLDAI PYLIEREGTD CENLPETHEI LRRMRAELDA RYQNRIFLAE ANQWPEDVLP YFGKGDECHM AFHFPLMPRI YMAVAQEDRH PIVEIMQQTP EIPEVCQWAI FLRNHDELTL EMVTDRERDY MYQTYAADPR ARINLGIRRR LAPLMENDRA RIELLNSLLM SMPGTPIIYY GDEIGMGDNV FLGDRNAVRT PMQWTSDRNA GFSRADPHSL YLPPIMDPVY GYEALNVEAQ SRSPGSLLNW MKRIIAVRKA HKAFGRGTLE FLHPGNRKVL AYLREYGDET ILCVANLSRS AQPVELDLSR FSGRVPVEMI GGSSFPPIGS LPYFLTLPGH SFYWFNLTTE AEAPSWHQES PRFFEPPVVV LPAGRQTARD IRRLPLRLQH RQVAQLEQEA LPAFLSVRRW FAAKGSEIER VSLLARAEFG PDRLLALLRV GAGGAEHTYF LPLAAAWEDE DGERVSGLMP HALAKIRRRY RVGVLFDALA DEGFCREVVA AMAGGRELEM GEGRVRFYAT GALEELLAGE PVGELAVRRA SVEQSNTSVI LGERLVLKAY RRLQPGVNPE LEIGRYLTEV RRFPNTPPLA GAVEYEDPRS GTVSLALLQG FVPSQGDGWS YVLGYLDRYL ERRLLSASWS PEEEGPAEPP GQEGQEADEG FFMELMRTLG VRTGELHAAL AAPTDDPSFS PEPAPPAEVS RWVEAVLDDL RLTLSLLERR RSGLPEEVRP EVDRLLRMEA RAFDRLEAIS ARGIRAVKTR HHGDYHLGQV LVAGNDFQII DFEGEPARTL EERRRKHSPL RDVAGMLRSF DYAAQTALMN LGADRAVGED PEPVVRRWER SVREAFLGGY AEGVRGAGVL PGEGEEAAAL VELFALEKAL YEIRYELDNR PDWIGIPVRG VLDLLTREES P
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