Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0305 |
Symbol | |
ID | 4114766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 316723 |
End bp | 318075 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638035094 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_643093 |
Protein GI | 108803156 |
COG category | [R] General function prediction only |
COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCCCA CGAAGTTCGT TCTCGGCGAC GAGCACATCC CGCAGAGCTG GTACAACATC GTGCCGGACC TGCCGTTCGC GCTGGAGCCG CCGCTCGACC CGGCCACCCG CGAGCCGGTG GGTCCGGAGG CCTTCGCCCC GATCTTCCCG CGCGCCATCA TCGAGCAGGA GGTGAGCGCC GAGCCGCGCG TCCCCATCCC GGAGGAGGTG CGAAAGATCT ACGGCCTCTG GCGGCCCACG CCCCTCTTCC GCGCCCGGCG CCTCGAGAGG CTCCTCGACA CCCCCGCCCG CATCTACTAC AAGTACGAGG GGGTCTCCCC CACCGGGAGC CACAAGCCCA ACACCGCCGT CCCCCAGGCC TACTACAACC GCGAGGAGGG CGTCCGGCGC CTCACCACCG AGACCGGCGC GGGGCAGTGG GGCTCCTCCC TCGCCTTCGC CTGCCGCCAG ATGGGCCTGG AGTGCACCGT CTACATGGTG CGCGTCTCCT ACGACCAGAA GCCCTACCGC CGCATCATGA TGCAGACCTA CGGCGCGGAC GTCCACGCGA GCCCCACGGA CCTCACGCAG GCGGGCCGCA GGATCCTCGA GGAGCACCCC GACTCCCCCG GCTCGCTCGG GATAGCGATC TCCGAGGCCG TCGAGGACGC GGTCGGCAGC GAGGACGCGA AGTATTCCTT GGGGAGCGTG CTCAACCACG TGCTCTTGCA CCAGACCGTG ATCGGGCAGG AGGCCATAGA GCAGATGGAG CTCGCCGGCG AGTACCCGGA CGTGGTCGTC GGCTGCGCGG GCGGCGGCTC CAACTTCGGC GGGATCGCCT TCCCCTTCCT GCGCGAGAAC CTGCTGAACG GGAGGGACAC CCGCTTTATC GCCGTGGAGC CCGCCTCCTG CCCGACGCTC ACCAAGGGCC GCTTCACCTA CGACTTCGGC GACACCGCGG GCACGACGCC CCTGATGAAG ATGTACACGT TAGGCCACTC CTTCGTCCCG GCGGGGATAC ACGCCGGGGG GCTCCGCTAC CACGGGGACT CCCCGATCCT GTCCGCGCTC GTGCACGAGG GGCTCGTGGA GGCGCGCGCC TACCTGCAGA ACGAGACCTT CGAGGCCGGG GTGGCGTTCG CGCGGGCCGA GGGCATAGTC CCCGCGCCGG AGGTCAACCA CGCCATAAAG GCGGTTATGG ACCTGGCGCT CGAGGCGAGG GAGGCCGGGG AGGGGCGCGT GATCCTCTTC AACATGTGCG GCCACGGGCA CTTCGACCTC TCGGCCTACG AGCGCTACCT GGCCGGGGAG CTCGTGGACC TGCAGCTCTC GCAGGAGGAG ATAGACCGGG CGCTGGAGGG GCTTCCGATC TAG
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Protein sequence | MEPTKFVLGD EHIPQSWYNI VPDLPFALEP PLDPATREPV GPEAFAPIFP RAIIEQEVSA EPRVPIPEEV RKIYGLWRPT PLFRARRLER LLDTPARIYY KYEGVSPTGS HKPNTAVPQA YYNREEGVRR LTTETGAGQW GSSLAFACRQ MGLECTVYMV RVSYDQKPYR RIMMQTYGAD VHASPTDLTQ AGRRILEEHP DSPGSLGIAI SEAVEDAVGS EDAKYSLGSV LNHVLLHQTV IGQEAIEQME LAGEYPDVVV GCAGGGSNFG GIAFPFLREN LLNGRDTRFI AVEPASCPTL TKGRFTYDFG DTAGTTPLMK MYTLGHSFVP AGIHAGGLRY HGDSPILSAL VHEGLVEARA YLQNETFEAG VAFARAEGIV PAPEVNHAIK AVMDLALEAR EAGEGRVILF NMCGHGHFDL SAYERYLAGE LVDLQLSQEE IDRALEGLPI
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