Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0297 |
Symbol | |
ID | 4117824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 305916 |
End bp | 307199 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638035086 |
Product | natural resistance-associated macrophage protein |
Protein accession | YP_643085 |
Protein GI | 108803148 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCTGACG TTACCGGCGT CGGGAGGGAG GGTGCGGGCG AGGCCCCGAG GAGCTGGGGC GCGCGCCTGA AGTACATCGG GCCTGGCTTT GTGGTGGCGG CGACCGGCGT GGGGGCGGGG GACATGGTCT CCTCGCTCTC GGCGGGCACC AACTTCGGGA CGGTTCTGAT CTGGGCGATC GTCATCGGGG CGCTGCTCAA GTACGTGCTC ACCGAGGGGC TCGGGCGGTG GTACATGGCG ACGGGGACGA CCATCCTCGA GGGCTGGCGC TCGCTCGGGC TGTGGGCGAG CCTGTACTTC GTGATCTACC TGCTCATAGT CACCTTCGTC TTCGGGGCGG CGGTGGTCTC GGCCTCGGCG CTGGCCGTCA CGGCGATGTT CCCGGGGGTG ATGCCGCTGT GGGCCTGGGC GGTGCTGCAC GGCATCTTCG GCTTTGTGGT CATCGGGATC GGGCGCTACC GGCTCTTCGA GCGGATAATG GAGTTTTTCG TCGCCCTGAT GTTCGTCACG GTGGTGGGGC TCGCCATCAT GCTCACCCCG GACCTCGGCG AGCTGGCGCT GGGGATAGTC GTCCCCCGCA TACCGGAGGG CTCGGTGCTC TACGCGCTGG CGGTCATCGG CGGGGTGGGC GGGACCTTCA CGCTGGCCTC CTACCCCTAC TGGGTGCGGG AGCGCGGCTG GAGCCGGCCC TCCTGGATCC CGATGATGCG CCTGGACCTG AGCGTGGGCT ACCTCTTCAC CGCGCTGTTC ATGGTCTCGA TGCTGGTCAT CGGCGCCGAG ATGCTCTTCG CCCGCGGGGA GGGCATAAGC GGCGAGGAGG GGCTCGTGGC GCTCTCCGAC CCGATCCGGG AGCGCTTCGG GACCCTGGCC AGCTGGTTCT TCCTCGTCGG CTTCTGGGCC GCCGCGACCA GCTCCATCCT CGGGGCCTGG AACGGGGCGG CGTACCTGTT CGCCGACTCG GTGCGCACCA TCCTGCGCGT GCCGGACGAG CGGGCCGGGG AATACCTCTC GGAGACGGGC CTCTGGTTCC GCCTGATGCT GGTGTGGATC ACCTTCCCCC CCATGCTCCT GCTCAGCTTC GGCCAGCCGG TGCTGCTGGT GGTGGTCTAC GCCGCCCTCG GGGCCTTCTT TATGCCGTTC ATGGCCCTCA CCCTGCTGTG GCTGCTCAAC TCCTCCCGGG TTTCCCGGGA GTACCGCAAC GGCTGGCTGA CGAACGCGCT GCTGGCCGCG GCGATCCTGC TGTTCGTGGT GGTGGGGGTG CAGGAGGTGG CGGGGGCGCT CTAG
|
Protein sequence | MADVTGVGRE GAGEAPRSWG ARLKYIGPGF VVAATGVGAG DMVSSLSAGT NFGTVLIWAI VIGALLKYVL TEGLGRWYMA TGTTILEGWR SLGLWASLYF VIYLLIVTFV FGAAVVSASA LAVTAMFPGV MPLWAWAVLH GIFGFVVIGI GRYRLFERIM EFFVALMFVT VVGLAIMLTP DLGELALGIV VPRIPEGSVL YALAVIGGVG GTFTLASYPY WVRERGWSRP SWIPMMRLDL SVGYLFTALF MVSMLVIGAE MLFARGEGIS GEEGLVALSD PIRERFGTLA SWFFLVGFWA AATSSILGAW NGAAYLFADS VRTILRVPDE RAGEYLSETG LWFRLMLVWI TFPPMLLLSF GQPVLLVVVY AALGAFFMPF MALTLLWLLN SSRVSREYRN GWLTNALLAA AILLFVVVGV QEVAGAL
|
| |