| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0296 |
|---|
| Symbol | |
|---|
| ID | 4117823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 305366 |
|---|
| End bp | 305842 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638035085 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_643084 |
|---|
| Protein GI | 108803147 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4708] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGGGC GGCGCAAGAG CCCGGCGCGC AGGGTGGCCG TCGCGGGGGT GGTGGGCGCC
CTGTACGTGG TGCTCTCCCT GGCGGTGGCC CCCATCGCCT TCGGCCCGCT GCAGTTCCGG
GTGGGCGAGG CCCTGAAGCC CCTCGTCATA AAGCACCCCG TCCTCATACC GGCCTTCGGG
GTGGGGACGG TGATCATCAA CCTCTTCAGC CCGTTCGCCG GGCTGCTGGA GCTGGCCTTC
ATGCCCGCCG TGGACGTGGC GGGCGGCGCC CTGTGCTGGC TCATAGCCCG CACCGTCGGC
GGGGCCTTCG GCACCTACCT GGCCTCCTTC GTCTACGCCG TCTTCACCGC CGCCGGCGTG
GGGGTGGTGC TGCACGTGGC CGCCGGGCTC CCCTACCTGC CCTCCTTCGC CTCCGTCGCC
GTCTCCGAGG CCATCCTGCT GCTCGCCGGA AACGCCCTCC TGGTGCGGCG GGTGTAG
|
|---|
| Protein sequence | MEGRRKSPAR RVAVAGVVGA LYVVLSLAVA PIAFGPLQFR VGEALKPLVI KHPVLIPAFG
VGTVIINLFS PFAGLLELAF MPAVDVAGGA LCWLIARTVG GAFGTYLASF VYAVFTAAGV
GVVLHVAAGL PYLPSFASVA VSEAILLLAG NALLVRRV
|
|---|
| |