Gene Rxyl_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0285 
Symbol 
ID4117812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp293446 
End bp294843 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content77% 
IMG OID638035074 
Producthypothetical protein 
Protein accessionYP_643073 
Protein GI108803136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCGCAG GGGGCCGAAG CGCGGGGAGA ACGAGGCTCC GCAGGGTCCT GCTCTTCGTG 
CTGGCCGGGG CGGCGCTCTC CGCGGCTCTC CTCGCCCTCT TCTTCTGGCC GTGGGTCGCG
GCGCAGGTTC GGGCGGTGGT GGTGCTCGCC GCCGTCCTCC GGCCGCCGGC GCTCTCCCCG
GCGGTGGCGG CTCTCACCCC CGAGCCCGCC CTCTCCGACC GCGAGGTGGC CGGGGTGCCC
ACCCTGGTGG CCCGCCCCGC GGGGGCGGGG GAGGGGCCGG CGCTCGTGTT CGTGAACGGG
GCCGTCCCCC CGGGGCGCCA CGAGCCCAAC GTCCGGCGGC TCGCCCGGGG GCTCGCCCGG
GCCGGCTACC AGGTCTACGT CCCGGACGTG CCGGGCCTGA GGAGCGGCGA GATCTCCCCG
TCCACCGTGG AGGCGACGGT GGGGGTGGCC CGCCGGGCGG CGGAGGGCTC CGAAAGCGGC
CGGGTCGGGC TCGCGGGGGT CTCGGTGGGG GCCTCCATCG CGCTTCTGGC CGCCGAGGAC
CCCCGCATAA ACGACCGGGT CTCCGTCGTC TCCGGGATAG CGCCCTACAC CGACCTGAAG
ACCGTCCTGC GGCTCGCCAC CACCGGCACC TACCTGCGCG GCGGCGAGCC CGTCCCCTAC
AGGACGCCAC CCTACCTGCG GCTGGTGGTC GCCCGCTCGC TGGTCTCCAT GCTCCCCCCC
GGCGAGGACC GGCGGGCCCT GATGCGCCGC CTGCCCTCCC TGGAGAGCTA CTACCCGCCG
CGCCTGGTGG ACGACGACCC GCTCGCGCCT CTGCGCGCCT TCGTCGCCGC GCGCGGCGGA
GAGCTCGGCC CGGCGGCGGA GAGCGCCGCC AGGCTCCTCG TCAACGAGGA CCCGGCGCGC
TTCGAGGAGC TCTTCGCCGC CCTCCCCCCG CGCCTCGAGC GGCTGGTGGG CGTCCTCTCG
CCGCTCGCCG GGGCGGAGAG GCTCCGGGCG CCGGTGTACA TAGCCTCCGC CCCCCGCGAC
AAGTACTTCC CGCTCGTCGA GTCGCGCCGG CTGGCCCGGG CCTCCCCGCG GGTGGACCTG
ACGGTCACCC GGACGCTCGT CCACGCCATC CCCCGCCCCT CCCCCGGCGA TCTCGCCGCC
TTCGCCCGGC TCGACGCCTT CGTGGTCCGG TCGCTGCGGG CCTCAGCCCA AGGCGCGCCG
CAGGGCGGGC AGCAGGATGC CGGGCTCGAG CAGGGCCTGC GGGGGGGCGA GCAGGTTCTT
CACCTCCAGC AGCCTCCGGG CCGCCCGCTC GTCCTCGGTG GCCAGCCGCA GCACCCCTTC
CGAGACCCGG TGGGCGAGCC GCCGGAGGGG GCCCAGCTCC TTGACGCTCG AGGCCGCCGC
CCACTGGGCG TCGCTTGA
 
Protein sequence
MGAGGRSAGR TRLRRVLLFV LAGAALSAAL LALFFWPWVA AQVRAVVVLA AVLRPPALSP 
AVAALTPEPA LSDREVAGVP TLVARPAGAG EGPALVFVNG AVPPGRHEPN VRRLARGLAR
AGYQVYVPDV PGLRSGEISP STVEATVGVA RRAAEGSESG RVGLAGVSVG ASIALLAAED
PRINDRVSVV SGIAPYTDLK TVLRLATTGT YLRGGEPVPY RTPPYLRLVV ARSLVSMLPP
GEDRRALMRR LPSLESYYPP RLVDDDPLAP LRAFVAARGG ELGPAAESAA RLLVNEDPAR
FEELFAALPP RLERLVGVLS PLAGAERLRA PVYIASAPRD KYFPLVESRR LARASPRVDL
TVTRTLVHAI PRPSPGDLAA FARLDAFVVR SLRASAQGAP QGGQQDAGLE QGLRGGEQVL
HLQQPPGRPL VLGGQPQHPF RDPVGEPPEG AQLLDARGRR PLGVA