Gene Rxyl_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0260 
Symbol 
ID4116091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp267001 
End bp267426 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID638035050 
ProductCRISPR-associated Cmr5 family protein 
Protein accessionYP_643049 
Protein GI108803112 
COG category[L] Replication, recombination and repair 
COG ID[COG3337] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01881] CRISPR-associated protein, Cmr5 family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGG AGAGAACCCT GGAGCAGCGC CGGGCGGCGC ACGCGCTCGC GGCGATTCAG 
GAGCTGCAGA GAGCCGGCCG CGGCGGGTAC GGCAACTACA AGAGCTACGT GAGCTCGCTC 
CCGGCCACCA TCCTCACCAA CGGTCTCGGC CAGGCGGCTG CAACTCTTCT TGCCGGAGCA 
AAGCTGAACA GCAAGAACCG CAATGCAGAC AATAGAGCAC GCGAGAAGCT CTACGATCAC 
CTTTCAAGCT GGCTCTGCGG AGGAGACGAG GAGAGCCCGT ATCAGAAGAA AGGTGATCTG 
CTCGAGAACA TCACCCGAAA CGATCAGGAC TGCTACATCC GGGCGCAGGC CGAGGCGCTC 
GAGTACCTCT CCTGGCTCAA GAGGTTCGCC GAGGCCTTCC TCGAAGGTAG CAAAGGGGAG 
AAATGA
 
Protein sequence
MAEERTLEQR RAAHALAAIQ ELQRAGRGGY GNYKSYVSSL PATILTNGLG QAAATLLAGA 
KLNSKNRNAD NRAREKLYDH LSSWLCGGDE ESPYQKKGDL LENITRNDQD CYIRAQAEAL 
EYLSWLKRFA EAFLEGSKGE K