| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0238 |
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| Symbol | |
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| ID | 4117728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 245063 |
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| End bp | 246490 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638035028 |
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| Product | amidase |
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| Protein accession | YP_643027 |
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| Protein GI | 108803090 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.190068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGGG AGCTGTGCTT TCTGCCGGCC GTGGAGCTGG CCGGGCTCCT CCGGCGGCGG
GAGCTCTCCG CCGCCGAGCT GATGGAGGCC CACCTCTCGC AGATAGAGCG CGTGAACCCC
GAGGTGAACG CCATCGTCAC CCTCCTCCCC GAGCGGGCTA TGGAGGAGGC GCGCCGGGCC
GACGCGGCGC TCGCCCGCGG GGAGGAGGTC GGCCCGCTGC ACGGTCTTCC GGTGGCCCAC
AAAGACCTCT TCTGGACGAG GGGCGTGCGC ACCACCTTCG GCTCCCCCAT CTTCGCCGGC
TTCGTCCCCG ACGCCGACGC CCTCATCGTG GAGCGGGCGC GGGGGGCGGG GGCCATCTCC
GTGGGCAAGA CCAACACCCC CGAGTTCGGC GCCGGGTCCC AGACCTTCAA CGAGGTCTTC
GGGGCCACCC TGAACCCCTA CGATACCTCC AGAACCTGCG GGGGCTCCAG CGGCGGGGCC
GCCGTCGCTT TAGCCTGCGG GATGGTCCCC CTCGCCGACG GCTCGGACAT GGGCGGCAGC
CTGCGCAACC CGGCGGCCTT CTGCAACGTG TTGGGCCTGC GGCCCTCGCC GGGGCGGGTC
CCCTCCTGGC CCTCCCAGAC CTCCTGGTCC CCGCTCTCGG TGGACGGCCC GATGGCCCGC
ACGGCGCGGG ACGCGGCGCT GATGCTCTCC GCGATAGCCG GGCCCGACCC GCGCTCGCCC
ATCTCCCTCT CCGAGCCCCC CGGGCTTTTC GCCGCCCCCC TGGAGCGGGA CTTCTCCGGG
GTGCGGGTGG CGTGGAGCCC GGACCTGGGG ACGCTGCCGG TGGAGGGGCG GGTGGCGGAG
GTATTCCGGG GGAGCCTGCC CGTGCTGGAG GGGCTCGGCT GCGAGGTGGA GGAGGCCGCC
CCGGACCTCT CCGGCGCCGA CGAGGTCTTC AAGGCGTTCA GGGCCTGGCA CTTCGAGCTG
GCCTACGGGG AGCTGCTGGA GGAGCACCGG CAGAGGATGA AGGACACCGT GGTCTGGAAC
ATCGAGGAGG GCCGCAGGCT GACCGGGCCG CAGCTCGGGG CGGCCGAGCG GAGGCGGACG
GAGCTCTACC ACCGCGTGCT GGGGTTCATG CGGCGCTACG AGTTTTTGGT CCTCCCCACC
ACGCAGGTGG CGCCCTTCCC GGTGGAGATG CCCTACGTGA CCGAGATAGA GGGCGCGAGG
ATGGAGACCT ACATCGACTG GATGCGCTCC TGCTACTACA TCAGCGCGGT GGGGCTGCCC
GCCGTCTCGG TCCCCTGCGG CTTTACGGGG GAGGGGCTTC CGGTGGGGCT CCAGATCGTG
GGCCGCCCCC GCGACGACTT CGGGGTGCTG CAGCTCGCAC ACGCCTTCGA GGAGGCCACG
GGATACGGGA GGCGCCGGCC GCCCGCGGCC GCCCGGCCCC TCAGGTGA
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| Protein sequence | MSGELCFLPA VELAGLLRRR ELSAAELMEA HLSQIERVNP EVNAIVTLLP ERAMEEARRA
DAALARGEEV GPLHGLPVAH KDLFWTRGVR TTFGSPIFAG FVPDADALIV ERARGAGAIS
VGKTNTPEFG AGSQTFNEVF GATLNPYDTS RTCGGSSGGA AVALACGMVP LADGSDMGGS
LRNPAAFCNV LGLRPSPGRV PSWPSQTSWS PLSVDGPMAR TARDAALMLS AIAGPDPRSP
ISLSEPPGLF AAPLERDFSG VRVAWSPDLG TLPVEGRVAE VFRGSLPVLE GLGCEVEEAA
PDLSGADEVF KAFRAWHFEL AYGELLEEHR QRMKDTVVWN IEEGRRLTGP QLGAAERRRT
ELYHRVLGFM RRYEFLVLPT TQVAPFPVEM PYVTEIEGAR METYIDWMRS CYYISAVGLP
AVSVPCGFTG EGLPVGLQIV GRPRDDFGVL QLAHAFEEAT GYGRRRPPAA ARPLR
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