Gene Rxyl_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0233 
Symbol 
ID4117724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp238976 
End bp239635 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content71% 
IMG OID638035024 
ProductGntR family transcriptional regulator 
Protein accessionYP_643023 
Protein GI108803086 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGACC TCAGCAGACC CTCCTTCGCC CAGAAGATAG CCCGGGTGCT GGCCGACGAG 
ATCGTGGAGC GGCGCCTCCC CCCGGGCCGC AAGCTGCGGG AGCAGGCGCT GGCCGAGCGC 
TTCGGGACCA GCCGGGCGCC CATCCGGGAG GCGCTGTACC TGCTCGGCCA GGAGGGGCTG 
GTGGAGCGGA CGCCGCGCCG GGGGGCGGTG GTCAAGCGCT ACTCGCCGCG GGAGGTGGAG 
GAGGTCTACC GGATACGCCT CACGCTGGAG GAGATGGCCC TGCGGCGGGC GTGCGACGGG 
CTCGGGATGG TCCGGCGCGC CGTGGCGGCC CTCGAGCCTA TCCTGGAGGA CATGGAGGCG 
AGCCGCAAGG ACGCGCGGCG CTACCACGAG CTGAACGTGC TGTTCCACAG GACGCTCGTG 
GAGGTCTCCG GCAGCCCGGT GCTTCCGCCC GTCTACACCC AGATAGAGGG GCCCCTGAGG 
ATGTTCCTGC GGCTCTCGGT GATGAGCCGG GAGGACGTAG AGAAGTCCAT AGGGGACCAC 
CGGAGGATCC TGGAGGCCAT AGCAGGGGGG GACGCGGAGC GCGCAGCCAG GATCCTCGGC 
GCCCACGAGC TCGACGGGAT GAACCGGGCG CTCGAGGCGA TGCGCGAGGA GGACCGCTAG
 
Protein sequence
MEDLSRPSFA QKIARVLADE IVERRLPPGR KLREQALAER FGTSRAPIRE ALYLLGQEGL 
VERTPRRGAV VKRYSPREVE EVYRIRLTLE EMALRRACDG LGMVRRAVAA LEPILEDMEA 
SRKDARRYHE LNVLFHRTLV EVSGSPVLPP VYTQIEGPLR MFLRLSVMSR EDVEKSIGDH 
RRILEAIAGG DAERAARILG AHELDGMNRA LEAMREEDR