Gene Rxyl_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0209 
Symbol 
ID4117836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp209961 
End bp211313 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content68% 
IMG OID638035000 
Productglycine cleavage T protein (aminomethyl transferase) 
Protein accessionYP_642999 
Protein GI108803062 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000425405 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGG AGGAGGCCGT GGGCCGGGCT GGCGGGCCGG TGGAGCTTCT GCGGAACGCC 
CGGGCGGCGC CCTACACCTT TCCGGTGACG CCGGAGTTCA GCAACTGGCG GGACGAGCAG
CGGGCTTGGA GGGAGAGCTG CGCCCTGCTC GACCAGTCCC ACCACATGAC CGACCTCTAC
GTGGAGGGGC CCGACGCCCT GAGGCTGCTC TCGGAGCTTG GCGTAAACAG CTTCGAGGGC
TTTGCCAAGG ACAAGGCCAA GCAGTTTGTG GCCTGCAACC CCCGAGGCTA CGTGATAGGG
GACGTCATCC TCTACTACCT GGAGGAGAAC CGGCTGGACC TCGTGGGGCA TCCCATGGTC
CTCGACTGGG TGCAGTACCA CGCGGAGACC GGCGGGTACG GGGTTTCTCT GGAGCGGGAC
GAGAACTCTG CGGTTCGGAG GGGGGCTCCG CCGAAGGTGT ACCGCTACCA GGTGCAGGGG
CCTGAGGCTG CGGCGCTCAT GCGGGAGGTG GTTGAGGGGG AGCTTCCCGA GGTGAGGTTC
TTCAACACGG CAGACGTGCG CATAGGGGGC TGCAGGGTGC GGGCGCTGCG GCACGGGATG
GCGGGCAGGC CGGGCTATGA GCTCTCTGGG CCCTGGGAGG AGAGGGAGCG GGTGATAGGC
GCGATCCTTG AGGCCGGCGA GAACCACGGC CTCAGGCGGG CCGGCTCCCT CGCCTACTCC
GCCGCGAACC TGGAGTCCGG CTGGCTTCCC GCTCCCCTCC CCGCCATCTA CACCGGGGAG
GAGATGAAGC CCTACAGGCA GTGGCTTCCG GCCCGGAGGG CGGGTTCGCT CGGCGGCAGC
TTCTATTCGG AGAGGATAGA GGACTACTAC TTCACCCCCT ACGAACTGGG TTACGGGCAC
ATGGTGAAGT TCGACCACGA CTTCGTGGGC AGGGAGGCGC TGGAGGAGAT GGCGGATGCT
CCGCAGCGCA GGAAGGTGAC GCTGGTGTGG GAGGGGGAGG ATGTGGCCGG CGTCTTTGGG
AGCCTCTTCG AGAGGGAGGG GCTTCCCGCA AAGTACATAG ACCTCCCCAA GTCCAGGTAC
GCCCTCTTCC ACTACGACCG GGTGGAGAAG GACGGCCGGG TCGTGGGGGT CTCCACCGAC
TGCGGCTACA GCTACAACGA GCGGGCGATG CTGTCGCTTG CGGTGGTGGA GGAGGAGTTC
TGCGAGCCTG GGACGGAGGT TGTGCTGTTG TGGGGCGAGG AGCCCAACAG CGCCAAGCCG
CAGGTGGAGG AGCACCGGCA GGTGGAGATA AGGGCGCGGG TGCAGCCCGC CCCGCTGGTC
GAGTTCGCCC GCACCGCCTA CCGGGCGGGG TGA
 
Protein sequence
MSLEEAVGRA GGPVELLRNA RAAPYTFPVT PEFSNWRDEQ RAWRESCALL DQSHHMTDLY 
VEGPDALRLL SELGVNSFEG FAKDKAKQFV ACNPRGYVIG DVILYYLEEN RLDLVGHPMV
LDWVQYHAET GGYGVSLERD ENSAVRRGAP PKVYRYQVQG PEAAALMREV VEGELPEVRF
FNTADVRIGG CRVRALRHGM AGRPGYELSG PWEERERVIG AILEAGENHG LRRAGSLAYS
AANLESGWLP APLPAIYTGE EMKPYRQWLP ARRAGSLGGS FYSERIEDYY FTPYELGYGH
MVKFDHDFVG REALEEMADA PQRRKVTLVW EGEDVAGVFG SLFEREGLPA KYIDLPKSRY
ALFHYDRVEK DGRVVGVSTD CGYSYNERAM LSLAVVEEEF CEPGTEVVLL WGEEPNSAKP
QVEEHRQVEI RARVQPAPLV EFARTAYRAG