Gene Rxyl_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0208 
Symbol 
ID4117835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp209161 
End bp209850 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID638034999 
ProductGntR family transcriptional regulator 
Protein accessionYP_642998 
Protein GI108803061 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00667385 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCCCG GTAAAATGCG TCGGATGGGA CGAGACGAGA AGCGGGCGGG TTCTCTGTCC 
GACGTTGCGT ACGAGAAGCT CTACGGCGAC ATAACCGGCG GGAGGCTGCA GCCGAACGAG 
CGCCTGATCG AGCTGGACAT CGCCCGCGAG CTCGGCGTGA GCCGGGCCGC CGTCCGGAAC 
GCGCTCATCC GGCTGGAGCA GGAGGGGCTG GTGAAGCGTG AGCCGAACCG GGGGGCGAGG 
GTGCGGCTGG TCTCCGAGGA GGAGGCGGTG GAGATCCTGG AGGCCCGGAT GGCCCTAGAG 
TGCGTGGCCG TGCGGCACGC CGCCCTGAAC CGCACCCAGG AGGACATCGC CGGGCTCAGG 
GAGATCCTCT CCCAGATGGA GAGCCGGCTG GAGGCCGGAG ACCTGCTGGG CGCCTCCGAC 
CTGAACGGCC AGTTCCACCG CCGCCTCGTC GAGATCTCCA ACCACGCCAC CATCTCCAAG 
CTGCTGAAGA TGCTTAACTC CCAGCTCATA AGGTTCCAGT ACCGTACCAT CCTCACCCCA 
GGCCGTCCGG CCAGCTCGCT CGCCGAACAC AGGGCCATCT TCGAGGCCGT CGAGGCCGGC 
GACCCGGAGA GGGCAGAACA GGCCATGCGC AGACACCTCT CCGGCGTGAC GGAAGCCCTC 
AGACGAGCCG CCGCCCAAGA GGCCCGCTAG
 
Protein sequence
MRPGKMRRMG RDEKRAGSLS DVAYEKLYGD ITGGRLQPNE RLIELDIARE LGVSRAAVRN 
ALIRLEQEGL VKREPNRGAR VRLVSEEEAV EILEARMALE CVAVRHAALN RTQEDIAGLR 
EILSQMESRL EAGDLLGASD LNGQFHRRLV EISNHATISK LLKMLNSQLI RFQYRTILTP 
GRPASSLAEH RAIFEAVEAG DPERAEQAMR RHLSGVTEAL RRAAAQEAR