Gene Rxyl_0197 details

Gene Information

• Locus tag: Rxyl_0197
• ID: 4117902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 199003
• End bp: 199707
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638034988
• Product: ABC transporter related
• Protein accession: YP_642987
• Protein GI: 108803050
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAGC TGAGCGAGGT CCACACCTAC TACGGCACCA GCCACATCCT GCAGGGGCTC 
TCGTTCTCCG TCCCGAAGAG GAGCTGCTCG GTGCTCCTCG GGCGCAACGG GGCCGGGAAG 
ACCACCACCA TCCACTCCAT CGCGGGCCTC GTCTCGCCCC GCAGCGGGAG CATCCGCTTT 
GTGGGGCAGG AGATCGCGGG CGAGCGGCCG CACAGGATCG CCCGGATGGG CATCGGGCTC 
GTCCCGCAGG GCAGGCGCAT CTTCCCCTCG CTCACGGTGG AGGAGAACCT GACGGTCGCC 
GGGCGCGGCC CCTCGGGCAA CGGCTCCTCC TCCTGGGACC TGCGGAGGGT CTACGAGCTG 
TTCCCCGCGC TGCGCGAGCG GGCCTCCAAC CTGGGAAACC AGCTCTCCGG GGGGGAGCAG 
CAGATGCTGG CCATCGGCCG CGCCCTGATG ACCAACCCGC GCCTGCTGCT GATGGACGAG 
CCCTCCGAGG GCCTGGCCCC GGCCATCATC GAGCGGGTGG GGGAGACCAT CCGCCGCCTG 
AAGGAGTCCG GGCTCTCCAT CCTGCTGGTC GAGCAGCACG TCTCGCTGGC CTGCAGCGTG 
GCGGACGAGG TGCTGGTGAT GAACAAGGGC AGGATCGTCT GGAGGGGTAG CCCGGAGGCC 
CTCCTCTCCG ACAGGCCCCT GCAGCAACGC TACCTGGGCG TGTAG 

 

Protein sequence

MLELSEVHTY YGTSHILQGL SFSVPKRSCS VLLGRNGAGK TTTIHSIAGL VSPRSGSIRF 
VGQEIAGERP HRIARMGIGL VPQGRRIFPS LTVEENLTVA GRGPSGNGSS SWDLRRVYEL 
FPALRERASN LGNQLSGGEQ QMLAIGRALM TNPRLLLMDE PSEGLAPAII ERVGETIRRL 
KESGLSILLV EQHVSLACSV ADEVLVMNKG RIVWRGSPEA LLSDRPLQQR YLGV