| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0176 |
|---|
| Symbol | |
|---|
| ID | 4117881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 179239 |
|---|
| End bp | 180393 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 638034967 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_642966 |
|---|
| Protein GI | 108803029 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1641] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00299] conserved hypothetical protein TIGR00299 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGGCG CGGCTGGGGA CATGATCCTG GCCAGCCTCA TCTCCGCCGG GGCCCCGGCG
GGCGAGGTCG AGGAGAGCGT GCGCGGCCTC GGGCTGCCCG TTCGTCTGGA GCTCCGGCGG
GTCGAGATCA GCGGCATAGC CGCCCTCGGC CTGAGGGTCG ACGCGCCCGA GGAGCACGCC
CACCGCACCT TCCGCGACAT CCGCCGCCTC ATCGAGGGCT CCGGCCTCCC CGAGCGGGCC
GCCGGGAGGG CGCTCGCGGC CTTCGGCCTT CTGGCCGCCG CCGAGGGCAG GGTGCACGGC
GTCCCGCCGG AGGAGGTCGC CTTCCACGAG GTCGGCGCCG CCGACTCCAT AGCGGACATC
GTGGGCGCCT GCGCGGCGCT GGAGCTGCTC GGCGCGGAGA CCGTAAGCTG CGGGCCGCTC
CCCATGGGCA GCGGCGTCGT CGAGGCCGCC CACGGCCCGC TGCCAGTGCC GGGCCCGGCC
ACCCTGGAGG TGCTGCGGGG CTGCAGGGTG CGGTGGCCCG AGGAGGAGCG GGAGATGACC
ACCCCCACGG GGGCGGCCCT CCTGAGGGCC CTCACCGGCG GGGAGTTCTC GGACGCCGCC
CCGCCGATGG TGCTGGGGGC CGCCGGCTAC GGGGCGGGGA CGGCCCGCCT GCGGGGCGCG
CCGAACCTGC TGCGGGCGGT GGTGGGCCGC CTGGAGGGCC CGGTCGGGGG GCTGGAGGTG
CTGGAGGCCA ACATAGACGA CGCGCCGGGC GAGGTGCTCG GCGCGGCCGT GGAGCGGCTC
CTCGAGGCGG GCGCCCCCGA CGCCTGGCTC GAGCCGGTCG TCATGAAGCG CGGCCGCGGG
GCCTACAAGC TGTGCGCCCT GGCCCGGCGG CAGGACAGGG AGCGCCTCGC CCGGCTGATG
ATGCGCGAGA CCGGGAGCCT CGGCGTCCGC CACCACGGGG TAGGGCGCAC CGTGGCGGAG
CGGCGCCTCG TGGAGGTCGA GCTGCCCTAC GGCCGGTGCC GGGTGAAGGT GGGAAGCCTC
GACGGAGAAG ACTTCGCCGT GGCCCCCGAG CACGCCGACG CAGCCCGCCT CGCCCGGGAG
AGCGGGAGGC CGCTCCCGCG GGTCTACGAC GACGCCCGCC GGGCTGCGTC GGAGCTGCTG
CGGCAGAGCC CCTGA
|
|---|
| Protein sequence | MGGAAGDMIL ASLISAGAPA GEVEESVRGL GLPVRLELRR VEISGIAALG LRVDAPEEHA
HRTFRDIRRL IEGSGLPERA AGRALAAFGL LAAAEGRVHG VPPEEVAFHE VGAADSIADI
VGACAALELL GAETVSCGPL PMGSGVVEAA HGPLPVPGPA TLEVLRGCRV RWPEEEREMT
TPTGAALLRA LTGGEFSDAA PPMVLGAAGY GAGTARLRGA PNLLRAVVGR LEGPVGGLEV
LEANIDDAPG EVLGAAVERL LEAGAPDAWL EPVVMKRGRG AYKLCALARR QDRERLARLM
MRETGSLGVR HHGVGRTVAE RRLVEVELPY GRCRVKVGSL DGEDFAVAPE HADAARLARE
SGRPLPRVYD DARRAASELL RQSP
|
|---|
| |