Gene Rxyl_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0172 
Symbol 
ID4117877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp176347 
End bp177174 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content75% 
IMG OID638034963 
Productmethyltransferase type 11 
Protein accessionYP_642962 
Protein GI108803025 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACCC CCGGGGAGAG GGCCGTCGGG GAGCACTACG GCCGGGAGGG GCTGGAGGAG 
AGGATCTCCG CCGCCCTGCG GTCCGCCGGG GCGGACCCCC TCGCGCCCTC GGTGGAGGAG
CTGCACGCCG TGGACCAGCT CCACACCCGC GGCGTGCGGG CGACGCTGGA GCTCGCCGAG
CTCGCCGGGG CCTCCCCCGG CGAGCGGGTG CTGGACGTGG GCGGCGGCCT CGGCGGCCCG
GCCCGCATCC TGGCCTCCAG GTTCGGCTGC CGGGTGGTGG TCCTCGACGT CACGGAGGAG
TTCTGCCGGG TCGGGGCGCT GCTCACCGCC CGCGCGGGCC TCGGGGAGCG CGTCCTCTTC
CGGCACGGCA GCGCGCTGGA GATCCCCTTC CCGGACGCGA GCTTCGACCT GGCTTGGACC
CAGCACAGCA CGATGAACAT CCCGGACAAG GACCGGCTCT ACCGGGAGAT CCACCGCGTC
CTCAAGCCCG GCGGCCGCCT GGCGATGCAC GAGATCCTGG CCGGCCCCTC CGGCCCGCCC
CGCCGCTTCC CCCTCCCCTG GGCCGCAAGC CCCGCCCTCA GCCACCTCCT CCCCCCAAAC
CGGATGCGTG CCTCCCTCTC ACGCGCCGGC CTCCGTGAGC TGGCCTGGAG CGACGTTACA
CCACAGACCG CCGAATGGCT GAAGACCCGC TCCTCCGGCC GCCCCTCCGG ACCGCCCCCC
GAGGCCTTCG CCAACCTCCT CCTGAGCATC CGTGAGGGCC GCGCCACCGC CGTCCAGGCC
CTCCTCGAAC GCCCCGAAGC ACAGCTTGAT GGGAACGGTT CTCGATAG
 
Protein sequence
MGTPGERAVG EHYGREGLEE RISAALRSAG ADPLAPSVEE LHAVDQLHTR GVRATLELAE 
LAGASPGERV LDVGGGLGGP ARILASRFGC RVVVLDVTEE FCRVGALLTA RAGLGERVLF
RHGSALEIPF PDASFDLAWT QHSTMNIPDK DRLYREIHRV LKPGGRLAMH EILAGPSGPP
RRFPLPWAAS PALSHLLPPN RMRASLSRAG LRELAWSDVT PQTAEWLKTR SSGRPSGPPP
EAFANLLLSI REGRATAVQA LLERPEAQLD GNGSR