| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0169 |
|---|
| Symbol | |
|---|
| ID | 4117874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 173360 |
|---|
| End bp | 173815 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638034960 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_642959 |
|---|
| Protein GI | 108803022 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCCGA CGAAGATCCT TCTGGCGACC GACGGTTCGG AGCACGCCCG GCGGGCGGCC
CGGGCGGCGG TGGAGCTTGC CCAGAAGACC GGCTCCGAGC TACACGTGGT GCACGTGGGG
CCGGCCGTCA CGAGCATCTT CGCCTACACC GAGCTCGACC CGGCGCGGGT CGAGGAGGAG
GCGCGCAAGG CGCTGGACGA GGAGGTGCGG AGCATCGAGG AGTCCGGCGG CGCGGTCGCC
GAGGGGCACG TGCTGCTGGG CAACCCCGCG GAGAGCATCG TCTCGCTGGC CGAGGAGATG
GGGGCGGGGC TCATCGTGGT CGGCAGCCGG GGCCTCGGCG GCCTGCGGCG GGCCCTGATG
GGCAGCGTCT CGGAGAGCGT TGTCCGGCAC GCGCACTGCC CGGTGCTGGT GGTGCGCGGG
GACGCAGAAG ACGCGGAAGG AGAAGGTGAT AGATGA
|
|---|
| Protein sequence | MFPTKILLAT DGSEHARRAA RAAVELAQKT GSELHVVHVG PAVTSIFAYT ELDPARVEEE
ARKALDEEVR SIEESGGAVA EGHVLLGNPA ESIVSLAEEM GAGLIVVGSR GLGGLRRALM
GSVSESVVRH AHCPVLVVRG DAEDAEGEGD R
|
|---|
| |