| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0168 |
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| Symbol | |
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| ID | 4117873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 172002 |
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| End bp | 173363 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638034959 |
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| Product | Iron-regulated ABC transporter permease protein SufD |
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| Protein accession | YP_642958 |
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| Protein GI | 108803021 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family
[TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA ACGGCGTGCC GGAGGTACTG AGGCGCAAGG GGATAGGGAT TGAGGCGGTC
AAGGCGCTCG CCGCCTTCAA GGACGAGCCG GGCTGGCTGC GGGAGAAGCG CCTTGCGGCC
TGGCGGACCT TCGAGGAGAT CCCGATGCCC ACCATGCGCG ACGAGGCGTG GCGCTACACC
GACGTCTCGG ACGTGCGCTT CGAGGAGTAC GTGCCCTACG CCCCGAGCCC CGACGTGGAG
CGCGAGGGGG ACCTCCCGGA CGCCGTGCAG CGGCTCATAA AGGAGGGCGA GGAGAACTCG
GCGCTCCTGG TGCAGCACAA CTCCGAGACC ACCTACGCCC GCACGGACGA GGCGCTGCGC
GCCCGGGGCG TCATCTTCAC CGACCTGCAC ACCGCCCTCA GGGAGCACGG GGAGCTGGTG
CGGGAGAGGC TCTTCAGGCT CGTCCCCGAG GGCTACGACA AGTTCGCCGC GCTCTCGGCG
GCGGCCTTCT CCGGCGGGTC GTTCCTGTAC GTGCCGCGCG GGGTCGAGGT GGAGGTCCCG
ATCCAGAGCT ACCGGTGGCT CGACGTGGCC GGCTCGATCA TGCCGCGCAC CCTCGTGATC
GTCGAGGAGG GGGCCTCGGT GACCTACATC GACGAGTACG CCTCCGAGGA CGGCGAGGAG
CCGGCCCTCT CCAACGGCGC GGTCGAGCTC TTCGTGGGCC AGGGGGCCCA CCTGCAGTAC
GTCTCGCTGC AGAACTGGGC GCGCAACGTC GTCCACTTCA ACACCATCCG CAGCCAGGCG
GAGAAGGACG CCACCATCAA CAGCCTGGTG GTCTCCTTCG GGGCCCAGCT CTCCAGGACC
AACGTGGAGG CGGGGCTCAC CGCCCCCGGC AGCGACTCGG AGATGCTCGG CCTCTACTTC
GCCGACGAGG ACCAGCTCAT AGACCACCAC ACCCTGCAGG ACCACATCGC CCCCCAGGCC
CACTCCGACC TCCTGTACAA GGGGGCCCTG CGGGACGAGT CGCTCACCGT CTTCTCCGGC
CTCATCCGGG TAGAGCCCGG GGCGCAGAAG ACCGACGCCT ACCAGACCAA CCGCAACCTC
ATCCTGGGCA CCGACGAGGC GATGGCCGTC TCCCTGCCGA ACCTGGAGAT CATGGCCGAC
GACGTGAAGT GCTCCCACGG GGCGACCACC GGGCAGGTGG ACGACCTGGA GCTCTTCTAC
CTGATGAGCC GCGGCATCCC GCGCATCGAG GCGGAGAAGC TCGTGGTCTT CGGGTTCTTC
GGGGAGGTGA CGAGCCGTAT CCCCCTCAGG GGCCTCAAGG AGAAGCTGGA CCGGGCGATC
GAGGAGAAGA TCGGCCTGGG CTTCGAGGAG CGGGTGGCTT GA
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| Protein sequence | MSTNGVPEVL RRKGIGIEAV KALAAFKDEP GWLREKRLAA WRTFEEIPMP TMRDEAWRYT
DVSDVRFEEY VPYAPSPDVE REGDLPDAVQ RLIKEGEENS ALLVQHNSET TYARTDEALR
ARGVIFTDLH TALREHGELV RERLFRLVPE GYDKFAALSA AAFSGGSFLY VPRGVEVEVP
IQSYRWLDVA GSIMPRTLVI VEEGASVTYI DEYASEDGEE PALSNGAVEL FVGQGAHLQY
VSLQNWARNV VHFNTIRSQA EKDATINSLV VSFGAQLSRT NVEAGLTAPG SDSEMLGLYF
ADEDQLIDHH TLQDHIAPQA HSDLLYKGAL RDESLTVFSG LIRVEPGAQK TDAYQTNRNL
ILGTDEAMAV SLPNLEIMAD DVKCSHGATT GQVDDLELFY LMSRGIPRIE AEKLVVFGFF
GEVTSRIPLR GLKEKLDRAI EEKIGLGFEE RVA
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