| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0158 |
|---|
| Symbol | |
|---|
| ID | 4117804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 164812 |
|---|
| End bp | 165735 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638034949 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_642948 |
|---|
| Protein GI | 108803011 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.488048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAGC TGCTCGGCGG GCTGGCCCCC CTGCTGGCCT CGATGGTCCG CAACGCCACC
CCGCTGGTCT TCGCCGCGCT GGGGGGGATG TTCAGCGAGC GCAGCGGGGT GGTCAACATC
GGGCTCGAGG GCCTCATGCT CATAAGCGCC TTCGCGGGGG TGGCCGGGGC CTTCTACTCC
GGGAGCGCGT GGGTCGGCCT GCTGTTCGCG CTGGGCGCGG GGCTGGGCTT CGCCCTGATC
CACGCCCTCA TGAGCATCAC CTTCGAGGCC GACCAGATCA TCTCCGGCAC CGCGATAAAC
CTGCTCGCCC TGGGCGGCAC GGGCTTTCTG ATGGAGCTGG TCTTCGGCCG GTCGGGCACC
TCGCCGCGGG TGCAGGGCTT CGAGCCGGTG GCTATCCCCG TCCTCTCGGA GATCCCGGTC
GTGGGCCGGG CCTTCTTCGA CCAGAGCCTG CTGGTCTACC TGATGTACGC GATGGTCCCC
CTCACCTACC TGCTGGTCTT CCGCACCCCC TTCGGGCTGC GGCTGCGGGG CACCGGCGAG
GCCCCGGAGG CCGTGGACAC CGCGGGGGTG AGCGTGGCCA GGATGCGCTA CTACGGGGTG
GCCCTCTCCG GGCTGCTCGC GGCCCTGGGC GGGGTGTACC TCTCCATGGG GATACTCTCG
GCCTTCACGG AGGGGATGAC CAACGGGCGG GGGTTCATCG CGCTGGCGGC CCTGATCTTC
GGCCGCTGGA ACCCGGTGGG GGCCGCGGGG GCGGCCTTCC TCTTCGGGCT GGCGCAGGCC
TTTATCTTCC AGGCGCCACA GGACGTGATC CCGCTGGAGT TCCTGCAGAT GATCCCCTAC
GTGCTGACGA TCGTCGTGCT GGCGGGCTTC GGGGGCCGGG CAGTGGCCCC GGCGGCGATC
GGCAAGCCCT ACCGCAAGGA GTAG
|
|---|
| Protein sequence | MEELLGGLAP LLASMVRNAT PLVFAALGGM FSERSGVVNI GLEGLMLISA FAGVAGAFYS
GSAWVGLLFA LGAGLGFALI HALMSITFEA DQIISGTAIN LLALGGTGFL MELVFGRSGT
SPRVQGFEPV AIPVLSEIPV VGRAFFDQSL LVYLMYAMVP LTYLLVFRTP FGLRLRGTGE
APEAVDTAGV SVARMRYYGV ALSGLLAALG GVYLSMGILS AFTEGMTNGR GFIALAALIF
GRWNPVGAAG AAFLFGLAQA FIFQAPQDVI PLEFLQMIPY VLTIVVLAGF GGRAVAPAAI
GKPYRKE
|
|---|
| |